Armigeres subalbatus: 134204694
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Entry
134204694 CDS
T09975
Name
(RefSeq) 5'-3' exoribonuclease 2 homolog
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
asua
Armigeres subalbatus
Pathway
asua03008
Ribosome biogenesis in eukaryotes
asua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asua00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134204694
09123 Folding, sorting and degradation
03018 RNA degradation
134204694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asua03021
]
134204694
03019 Messenger RNA biogenesis [BR:
asua03019
]
134204694
03009 Ribosome biogenesis [BR:
asua03009
]
134204694
03016 Transfer RNA biogenesis [BR:
asua03016
]
134204694
Transcription machinery [BR:
asua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
134204694
Messenger RNA biogenesis [BR:
asua03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
134204694
Ribosome biogenesis [BR:
asua03009
]
Eukaryotic type
Pre-60S particles
RNases
134204694
Transfer RNA biogenesis [BR:
asua03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
134204694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
134204694
NCBI-ProteinID:
XP_062535461
LinkDB
All DBs
Position
1:107985036..108033201
Genome browser
AA seq
1007 aa
AA seq
DB search
MGVPAFFRWLSRKYPSVIVECVEQKHADEHGNPLYDDMTEPNPNKVEFDNLYLDMNGIIH
PCTHPEDKPAPKDEDEMMVAIFECIDRLMNIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
ASKEAAEKASEIQKIRAELRSKGCILPPEKEKGAHFDSNCITPGTPFMDRLSKCLQYYVH
DRMNNNPGWKGLKVILSDANVPGEGEHKIMDYIRKQRSQPDHDPNTHHVLCGADADLIML
GLATHETHFTIIREEFLPNKERPCDICQLMGHEMKDCTGLQSERDVNRTPPPPGKETQFI
FVRLNVLKEYLAKELDMPNLPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIRENAIDR
LVTLYKKCVYKTKGYLTDSGSVTVDRVELIMTDLGYAEDEIFRQRKVSEDRFKERNKRMK
MQKEREQRPNFEQINRSQFAPTPLGRGVTPQAVQNPRQEAAHFRMLGNNQTQQQQQNNSN
DNQNRRGQKRKAEEPLTPASAEEPETPDEVRLWEDGFKDRYYESKFDVAPQNMKFRQTVA
WEYVRGLCWVLKYYYQGCASWEWYFPYHYAPFASDFKALSNVNTRFERGTPFKPLQQLMG
VFPAASRSHVPPAFGELMVDPKSPIIDFYPIDFHIDLNGKKFAWQGVALLPFVDEKRLFK
ATDPKVPLLTHEERLRNENGLARLYLSPGPDAYKIAKGLYSGTVNFEQEVPILADCMRGV
VIPTKENVPHDGVLPSPIPGLHPVCENRIVTMKFLDPQYADDFVYPSRKLEGARDQPKVL
GANEGPVIGFGQRTNRGGLGSAGHRMMNHYTGNNRGGGGGGGGGGGGGGGGGNGGRNDYS
NFSRGGNSSNNSSYQSSASNSSQSGYNNSNNRSGPSASGNLSAFEQLSSRINQYQQQVMS
EISRNASSSGMLLPNPFANQIPYDYNNSRDRQNSGGYQNRRGGGGGFQQNQRGRNAGGNF
GGNQFGQRNQGGQRFNNNFNNGGGGGGNRFGQNNAGGNRFNNNRRNF
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgggagtaccagcattctttcgctggttatcgcggaagtatccgtccgtcattgtggaa
tgcgtggagcaaaagcatgccgatgagcacggaaacccgttgtatgacgatatgaccgaa
ccgaatccgaataaggtggaatttgataacttgtatctggacatgaacggtatcattcat
ccgtgtacacatccggaggacaaaccggcaccgaaagacgaggacgagatgatggtggcc
atcttcgagtgcattgaccgtctgatgaacattgttcgaccgcggaaattgctctacatg
gccatcgacggtgtggccccacgggccaaaatgaaccaacagcggtcacgacgttttcga
gcatccaaggaagcggcagagaaagcttccgaaatacagaaaattcgagcggaactgcga
tcgaagggatgcattcttccacctgagaaggagaaaggggcccacttcgattccaactgc
atcactccggggactccgttcatggataggctgagtaaatgcctgcagtactacgtgcac
gatcgcatgaacaataatccgggatggaagggcctgaaagtaatcctgtcggacgcgaat
gtgcccggcgaaggcgagcacaaaattatggactacattagaaagcaaagatcgcaacca
gatcacgatccgaatactcatcacgtcctttgtggggcggatgccgatttgattatgttg
ggactggcaacccacgagacacattttaccatcattcgagaggaattccttcctaataag
gaacggccatgcgatatttgccagttgatgggacacgaaatgaaggactgtactggttta
cagtcagagcgggacgtcaatcggaccccacctcccccgggtaaagagacacagtttata
tttgtccgactgaacgtactcaaagagtacctcgctaaagaactggacatgcctaactta
ccgttcaagtatgactttgagcgcgtcattgacgattgggtgttcatgtgcttcttcgta
ggaaacgatttcctaccacatttgccaagtttggaaattcgagagaacgccatcgatcgg
ttagtcacgctgtacaaaaagtgtgtctacaagactaaaggctacctcaccgattccggt
agcgtcactgtcgatcgcgtcgagttaatcatgacggatctcggctacgctgaggacgaa
attttccgccaacgcaaggtaagtgaggatcgcttcaaagagcgcaacaagcgcatgaaa
atgcaaaaggaacgcgaacaacgacccaacttcgagcagattaacagatcgcaatttgca
ccgacccccttgggaaggggtgtcactccgcaggccgttcagaacccgcgacaggaggcg
gcccacttccggatgcttggcaataaccaaacgcagcagcagcagcagaataattccaac
gataatcaaaaccgccggggtcagaagcgtaaagcggaggagcccctcactccggcttcg
gccgaggaaccagaaacgcccgacgaggttcgtttgtgggaggatggatttaaggatcgt
tactatgagtccaagttcgatgtggcgccccagaacatgaaattccggcaaactgttgcc
tgggagtacgtccgtggtctctgctgggtacttaaatactattaccagggctgtgccagc
tgggagtggtacttcccgtaccactacgccccgtttgcttctgactttaaggctctgagc
aacgttaacactcgcttcgagcgaggcactccgttcaaaccgctgcaacagctgatgggt
gtgtttccggctgccagtagaagtcacgttccgccggcgttcggagagctgatggtcgat
ccgaaatcgccgatcattgacttttatccgatcgatttccatattgatttgaacgggaag
aagtttgcctggcagggcgtagccctgctaccgttcgtcgatgagaagcggttattcaag
gcgaccgacccgaaggttccgctgctgacccacgaggaacggttacgcaacgaaaatggc
ctcgcccggttatacttgtcacccggtccggatgcatacaaaatagccaaagggttatac
agcggcacggtcaacttcgaacaggaagttcccatcctggccgactgtatgcggggtgtt
gtcatcccgaccaaggaaaacgtcccgcacgatggcgttctaccgtcacccattcccgga
ttgcacccggtgtgcgagaacagaatcgtaaccatgaagttcctggatccgcagtatgcg
gatgatttcgtatatccatcccggaagctggagggagctcgcgatcagccgaaggtactg
ggagcgaacgagggtccggttattggattcggacagcgaacgaaccgtggcgggctgggt
agtgccggtcacaggatgatgaatcattataccgggaacaacagaggaggtggcggtggc
ggcggtggaggaggaggaggcggaggtggaggtggaaatggtggacgcaatgattacagc
aacttttcgagaggcggaaactcatccaacaatagcagctaccaaagctctgccagtaac
agctcgcagtcgggctacaacaattcgaacaatcgcagtggacccagtgccagcggcaat
ttgagcgccttcgagcaactgagcagccgtatcaatcagtatcagcagcaggtgatgagc
gaaatctcccgcaatgccagcagttccggaatgttgctacccaatccgttcgccaatcaa
attccgtacgactacaataatagcagggatcggcagaacagtggtgggtaccagaaccga
cggggtggtggcggcggtttccagcagaatcaacgtggaagaaacgctgggggtaatttc
ggtggcaatcagttcgggcagcgcaatcaaggcggtcagcgatttaacaacaacttcaac
aatggagggggtggcggtgggaatcgctttggtcagaacaatgccggaggcaatcggttt
aataacaatcggagaaacttttaa
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