Armigeres subalbatus: 134213317
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Entry
134213317 CDS
T09975
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
asua
Armigeres subalbatus
Pathway
asua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134213317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asua03041
]
134213317
Enzymes [BR:
asua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
134213317
Spliceosome [BR:
asua03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
134213317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
DEAD
AAA_22
AAA_19
Flavi_DEAD
AAA_30
nSTAND3
nSTAND_NTPase5
Cas3-like_C_2
T2SSE
Motif
Other DBs
NCBI-GeneID:
134213317
NCBI-ProteinID:
XP_062548259
LinkDB
All DBs
Position
2:402586582..402617877
Genome browser
AA seq
890 aa
AA seq
DB search
MASRRKKESSSEDSSVDSEEEARRRDIKERDEFSQRLKQKDEGRTRKVVESTSRKAYEEA
AKRLKLEAEDRDKLLPKLRIHSRRQYLEKRKDDKVAELEADILDDEYLFEESQITDRERQ
DREYKKSLLQIAKDHEKARELERVQRYHMPKDIKKGDKEEYVEVDEREKIPNAEQKKWEA
EQLASAVYKFGSKDAKARQQEEYELLLDDQIDFVQALRLDGTKEKDRKPPVSEAERKKMD
IEDTKKSLPVYPFKEDLIAAIKEHQILIIEGETGSGKTTQIPQYLYEAGFTNDGKKIGCT
QPRRVAAMSVAARVAQEMGVKLGNEVGYSIRFEDCTSERTVIKYMTDGTLHREFLSEPDL
ASYSVMIIDEAHERTLHTDILFGLVKDIARFRVDLKLLISSATLDAEKFSEFFDDANIFR
IPGRRFPVDIYYTKAPEADYIDACVVSVLQIHATQPLGDVLVFLTGQEEIEACQEMLQDR
VKRLGSKLKELLILPIYANLPSDMQAKIFEPTPPNARKVVLATNIAETSLTIDNIIYVID
PGFAKQNNFNSRTGMETLMVVPISKASANQRAGRAGRVAPGKCFRLYTAWAYKHELEENT
VPEIQRINLGNAVLMLKALGINDLLHFDFLDPPPHETLVLALEQLYALGALNHHGELTKL
GRRMAEFPVDPMMAKMLLASEKYKCSEEVVTIAAMLSVNGAIFYRPKDKIIHADTARKNF
NHMHGDHLSLLQVYNQWAESDYSTQWCYENYIQFRSMKRARDVREQLVGLMQRVEIEMVS
GLPETINIRKAITSGYFYHIARLSKGGHYKTVKHNQTVMIHPNSALFEELPRWVLYHELV
FTTKEYMRSVIEIESKWLLEAAPHYYKPKELEDSTNKKMPKTVGRATLTE
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagacgtaaaaaagagagctcttcggaggatagctctgtggacagcgaggag
gaggctcggcgccgcgatatcaaagaacgagacgagttttctcagcgcctcaagcagaaa
gacgaaggtcgcactcgaaaagtggtcgaatctaccagccggaaagcgtacgaagaagcg
gccaaacgtttgaaacttgaggcagaagaccgggacaagttgcttccgaagttgaggatt
cactcccgccgccagtacctggaaaaacgaaaagatgacaaagttgccgaactcgaggcg
gacattctggacgatgagtacctgtttgaggagtcgcaaatcacggatcgggaacggcag
gatcgtgagtacaagaaaagtttgctccaaattgcaaaggatcatgagaaagcgagggaa
cttgaaagggttcaacggtatcacatgccgaaggacattaagaagggtgataaggaagag
tatgtggaggtggatgagcgagagaagattcccaatgcggagcaaaaaaagtgggaagct
gagcagctggcctctgccgtttacaaatttggatcgaaagatgcaaaagccagacagcaa
gaagagtatgagttgttgctggacgatcaaattgatttcgttcaggctttgcgattggat
ggaacgaaggaaaaggaccggaagccgcctgtttccgaagctgaacgcaagaaaatggac
attgaggatacgaagaaatcgcttccggtgtatccgtttaaggaggatttgattgcagct
attaaagagcatcaaattctgatcattgagggagaaacgggttccggtaaaacaacccag
ataccgcagtatctctacgaagcgggattcaccaatgatggcaaaaagattgggtgtact
cagcctcgtcgtgttgctgccatgtccgtggcggctcgcgtagcacaggaaatgggagta
aaactgggcaatgaagtgggatatagtattcgtttcgaagattgcacttccgagagaacc
gtaatcaaatatatgacggatggaacgttgcaccgggagttcctttcagagccagacctt
gcgtcgtacagtgtgatgatcattgatgaggctcacgaacggacattgcatacggacatt
ttgttcggattggtgaaggatatcgcacggtttcgtgtggacctgaaactgttgatttcc
agcgctacgttggacgcggagaaattttccgagttttttgatgatgcaaatatttttagg
attcctggtcgtcgatttccggttgatatttactacacaaaagcgccggaagcggactat
atcgatgcttgtgtggtatcagtattgcaaattcatgccacccaacctctgggcgatgtt
ttggtgtttttgacgggtcaggaagaaattgaagcttgtcaggagatgcttcaggatcgt
gttaagcggctgggttccaaactgaaagagctgctcatccttcccatctacgcaaatcta
ccatcggacatgcaggcaaaaattttcgaaccaactccaccaaatgcgcggaaagtggta
ctggcaaccaatattgctgagacgtcccttacgatcgataacatcatttacgtgatcgac
ccggggtttgccaagcaaaacaacttcaactcgcggactggaatggaaactctgatggtt
gttccgatttccaaagcttctgccaaccagcgagcaggtagagcgggccgagtcgctcct
ggaaaatgtttccgactttatacagcatgggcatataaacatgaattggaagaaaacact
gttcctgaaattcagcgaatcaaccttggcaatgctgtgctgatgctaaaagcactcgga
ataaacgatttgcttcacttcgattttctcgaccctccccctcatgaaacgttggttttg
gctttggaacaactttacgcgttaggtgctttgaaccatcacggggaactaaccaaactt
ggccgacgaatggctgaattcccagtagatccgatgatggccaagatgttgttggccagt
gagaagtataaatgctctgaagaggtcgtcacaattgctgcaatgctctcggtcaacgga
gctatcttctaccgaccaaaagacaaaataattcacgctgatacggcgcggaaaaatttc
aaccatatgcatggcgaccatctcagtttgttgcaggtttataatcaatgggccgaatcg
gactacagcacccaatggtgctacgaaaactacatccaattccgatcaatgaagcgcgcc
cgtgatgtccgcgaacagttggtcggtttgatgcagcgtgtggaaatcgaaatggtatcc
ggattgccggagacaatcaacattaggaaggctatcacttcgggttacttctaccacatt
gctcgcctttccaagggcggtcactacaaaaccgtcaagcacaatcaaacggtgatgatc
caccccaactcggcactgttcgaagagctcccgcggtgggtgctgtatcacgagttggtg
tttaccactaaggagtatatgagatcagtgattgaaattgagagcaagtggctgctggaa
gcagctccgcactattacaaacctaaagagctggaggactccaccaacaagaagatgccc
aaaacagttggacgagctacactgaccgagtag
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