Armigeres subalbatus: 134213346
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Entry
134213346 CDS
T09975
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
asua
Armigeres subalbatus
Pathway
asua03013
Nucleocytoplasmic transport
asua03015
mRNA surveillance pathway
asua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134213346
09122 Translation
03013 Nucleocytoplasmic transport
134213346
03015 mRNA surveillance pathway
134213346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asua03019
]
134213346
03041 Spliceosome [BR:
asua03041
]
134213346
Enzymes [BR:
asua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134213346
Messenger RNA biogenesis [BR:
asua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
134213346
Spliceosome [BR:
asua03041
]
Complex C
Other components
EJC/TREX
134213346
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
134213346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
134213346
NCBI-ProteinID:
XP_062548317
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All DBs
Position
2:408469756..408474775
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AA seq
423 aa
AA seq
DB search
MADNDDLLDYEDEDQTEQVTTEPAEQPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENVPYVLVMCHTRE
LAFQISKEYERFSKYMPSIKVAVFFGGLPIQKDEEVLKSTNPHIIVGTPGRVLALIRNKK
LNLKHLKHFILDECDKMLEQLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQ
DPMEVYVDDETKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALA
QLLTEQNFPAIGIHRGMVQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM
PEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKILNEVQDRFDVNITELPDEIDLSSYI
EGR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaatgatgatcttttggattacgaggatgaggatcagactgagcaggtcacc
accgagcccgcggagcagccaaagaaggacgtaaagggaacgtacgtttccatccacagc
tccggattccgagattttcttttgaaaccggaaattttgcgagccattgtcgattgcggt
tttgagcatccgtctgaagtacaacacgaatgtattccacaagcggtgctcggaatggat
attctgtgccaggccaaatctggtatgggaaagacggcggtattcgtattggccacgctc
caacagttggaaccgacggaaaacgttccatatgtgctggttatgtgccatacccgcgag
ttggcattccagatcagcaaggagtatgaacggttttcgaagtatatgcccagcattaaa
gtggccgtcttctttggcggtttgcccattcaaaaggacgaggaggtgctgaagtcgact
aatccgcacattatcgttggaacacctggacgcgttttggctcttatccggaacaaaaag
ttgaacctgaaacaccttaagcattttattctcgacgagtgtgataaaatgcttgaacaa
ctagatatgcggcgcgatgtgcaggaaatatttagaaacacaccgcacggcaagcaagtt
atgatgttctccgctactctcagcaaggaaatccgcccagtttgcaagaagttcatgcaa
gatccgatggaagtttatgtcgacgatgaaaccaaactgacactccatggtctgcagcag
cactacgtaaagctgaaggaaaatgagaaaaacaaaaagcttttcgaacttcttgacgtt
cttgagttcaaccaggttgttatctttgtcaaatccgtacagcgttgtatggccctggca
cagcttttgacagagcagaatttccccgccattggtatccatcgtggtatggtacaggag
gagcggttatctcgctatcaacagttcaaggatttccagaaacgtatcctggtggctacc
aatctgttcggacgaggcatggacatcgaacgcgtcaacatcgtgttcaactacgacatg
ccagaagactccgatacctacctgcatcgtgtagcgcgtgccggtcgtttcggaaccaaa
gggttggcgatcacattcgtttctgatgaaaccgacgccaagattctgaacgaagtccag
gatcggttcgatgtcaacatcaccgaactaccggacgaaattgatctctcttcctacatt
gaaggacgataa
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