Armigeres subalbatus: 134214715
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Entry
134214715 CDS
T09975
Name
(RefSeq) collagen alpha-1(IX) chain-like isoform X1
KO
K08131
collagen type IX alpha
Organism
asua
Armigeres subalbatus
Pathway
asua04512
ECM-receptor interaction
asua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134214715
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134214715
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
asua00535
]
134214715
Proteoglycans [BR:
asua00535
]
Extracellular matrix (ECM) proteoglycans
Others
134214715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
134214715
NCBI-ProteinID:
XP_062550020
LinkDB
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Position
2:complement(92019882..92035351)
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AA seq
775 aa
AA seq
DB search
MRRRLLLFIQLNIAVVLAQDIFGIGEYDEGPCGRWKPGDVDLRSFDLIREFHLDQMESSS
HHVYRIEGSNVLQTAYRLENEANLTMRTVDAFPLGLPHQFSLECTYRTDSEPVSAWHLFE
VTNEHHESQLAVTMNPGRHTLEIGLPGLEGDLQIVEYHNSALFDQRWHKIMLGVTNDHLN
LWIDCQPVRDVQGNLNAPLETRGRFDTNNGFVSISRYAETSVMEPESPIVDLQWMVMNCD
PTRPARGNCDELPLYDVAHLSNQLPHGQEPKADCNTVCPPGYNGTDGAPGLPGAPGVPGI
KGEAGANGRRGPPGPRGFEGQPGASIRGDKGDIGQKGEPGAAIAAGVGVIGPPGLPGPRG
PPGLGSTGQKGEQGEIGPPGLRGESIRGQPGVPGFPGPEGPPGISIRGEKGDRGEAGLPG
RAGISIPGVPGIKGEKGEPGDVSAAIGVRGEKGDKGDSGSRGPTGIQGLPGLPGPIGSPG
LPGLPATENSYATGNLGVTIPGPRGVPGAPGTPGQPGPPGPPGPPGEGSSSGGGRYLENF
MSYGHRGPVGYTGLPGERGAGGDRGPEGSVGLPGIPGQDGAPGIQGSPGVPGQPGASGLP
GPPGRSYTESEVRDICAAVLRDHLAELTAGLIGPPGPPGVTKTGKPGLPGKPGPKGDRGY
PGSPGERGYPGEFGNPGQPGPPGDRGEPGLEGRPGHDGFGRDGAPGPVGPPGPPGREVPG
APGRQGERGDTGKPGAPGIRGAQGVPGACPNDCYLAAAAAAQSFRANQQTKGPVY
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggaggcttttactttttatacagctaaacattgctgtcgttctagcgcaggac
atttttggcattggagagtacgatgagggaccatgtggtcgttggaaacccggtgatgtc
gatctacgctcctttgatcttatccgtgagttccatttggatcaaatggagtccagcagc
caccatgtgtacagaatcgaaggtagcaatgttcttcaaacggcctaccggttggaaaat
gaggccaaccttaccatgaggacggtggatgcattccctctgggtctcccccatcagttc
tcactcgaatgcacctacaggacggatagcgagccagtgtcagcgtggcatctgttcgag
gtgacgaatgaacatcatgaaagccaactagcggtgacaatgaatccgggaagacatact
ttagaaattggattgcccggattggaaggagatttgcagattgttgaataccacaattct
gcgttattcgatcaacgttggcacaaaatcatgctgggagtgacgaacgaccaccttaat
ctctggatcgattgtcagccggttcgggatgttcaaggaaatctaaatgcgcctctggag
acacgtgggcgcttcgataccaacaatgggttcgtttcgatctcgcgatatgcggagaca
tctgttatggaaccggagtctccgattgttgatttgcagtggatggtgatgaattgcgac
ccaacacgaccggcacgtggcaattgtgacgaactaccgttgtatgatgtggcacatttg
agcaatcagttgccgcatgggcaggagcccaaagctgattgcaataccgtttgtccccca
ggttataatgggactgatggagctcctggtttacctggagccccaggtgttccaggaatt
aagggtgaagcaggggctaacgggagacgtggtcctcccgggccacgaggtttcgaaggc
caaccaggagcatccattagaggcgataaaggcgacattggccaaaagggagaacctgga
gcagcgatcgctgccggtgttggtgtgattggtccacctggtttacccggtccccgagga
ccccccggcttaggaagtacaggacaaaagggtgaacaaggagaaattggaccaccaggg
ttgagaggtgaatccattcgagggcagcctggcgttcctggatttccgggacctgaggga
cctccaggcataagtattagaggtgaaaagggtgatcgtggggaagctggactacctggt
cgtgcaggaatatccataccaggtgttccaggcattaagggcgaaaaaggagaaccggga
gatgtatccgctgctataggagtacgaggggaaaagggagataagggagatagcggttca
cgaggacctaccggtattcaaggtttgccaggtttacctggccctataggatctcctggt
ctacctggattgccagccactgaaaatagttatgccactggtaacctaggagtgaccatt
ccaggaccccggggagtcccaggtgccccaggaactccgggtcaacctggtccaccggga
ccaccggggccaccaggagaaggatcttcttcgggtggtgggagatatttggagaacttt
atgtcatatggtcataggggtcctgtgggatacactggacttccaggcgagagaggggct
ggcggcgatagaggtccagaaggcagtgtcggactaccaggtattcccgggcaagatggt
gctccaggaattcaaggatcaccaggagtgcccggtcaaccaggagcatcgggtctaccc
ggccctccaggaaggagttacacagaatcggaagtgcgagatatatgtgcagctgtgttg
agagatcatcttgctgagctgaccgcgggcctgatcggtcctcctggacctccaggtgta
acaaagactggaaaaccaggtttgcctggtaaaccaggacctaaaggcgatagaggatat
cctggatctcctggtgaacgaggatatcctggggaatttggcaaccccggccagccggga
ccaccaggagatcgtggagaaccgggtctagagggtagaccaggacatgatgggtttgga
cgagacggcgctccaggcccagtgggtccccctggtccaccgggtcgagaggttccagga
gcacctggcaggcaaggtgaaagaggagatacaggaaaaccgggtgctcctggcattcgg
ggcgctcagggcgttccaggggcatgtcccaatgattgctatctcgctgcagcagctgct
gcacagagtttccgtgccaatcaacaaaccaaaggaccggtttattaa
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