Armigeres subalbatus: 134218429
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Entry
134218429 CDS
T09975
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
asua
Armigeres subalbatus
Brite
KEGG Orthology (KO) [BR:
asua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asua04147
]
134218429
00535 Proteoglycans [BR:
asua00535
]
134218429
00536 Glycosaminoglycan binding proteins [BR:
asua00536
]
134218429
Exosome [BR:
asua04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134218429
Proteoglycans [BR:
asua00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
134218429
Glycosaminoglycan binding proteins [BR:
asua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134218429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
DUF1554
Motif
Other DBs
NCBI-GeneID:
134218429
NCBI-ProteinID:
XP_062553381
LinkDB
All DBs
Position
2:complement(31471437..32336528)
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AA seq
1181 aa
AA seq
DB search
MKYSSVFERWFQRLPFLWFLLTHVRSSSVAASELALFGGQGIRDVFAEFDLLLAIKIPPE
EGITFVDGSDGFPAFGVAPHADIKSPYRTILPEKLTEFTIIATVRPGSRSGGYVFSVVNP
LDTVVQLGLLLEPILATDQWNITLIYTDANVERVSQPLVSFQIPYTKSWIKLIFKVLNNQ
VVFYNNCVETETVVVKKEPRSLTFDGASTLYIAQAGPILKRNFEGTLLFLKLYGNPEIVK
THCNRTATELDDSSNVIYEEDDFLGDSDGVGGEIFADSLSSGDDDDSFDLPMISPPPPEY
GYRSKGEKGERGPKGPPGDAIRGPPGPPGPHGPPGPPGPPGAAGPRGPGLLDEGSGDDAK
RLSQLFDLPTSNFLNKCYCNVTEVIEDLKRDITLREYLRGPEGPQGREGKTGTPGLTGAT
GPPGERGVGGQKGDKGDRGEPGLPGVEGIQGSKGEPGLDGMPGPAGLPGTPGPPGIPENF
DMSWNPSRMFKESMLGAPGIQGLRSASPGSKGDPGEKGDIGLAGPKGEQGSKGERGDPGL
IGAKGERGHTSIGAPGPKGSVGPPGVPGIPGQTGSSGTKGDKGGIGDVGPAGPPGPPGMV
IYSDAKNSTGGSDCHCQPGPPGAPGPRGPTGFDGTPGLPGETGLPGHPGLPGDKGDKGSA
GPKGDKGPEFIINENASFNSSRSSRGEKGERGPRGRRGKPGPIGPPGRPAGPSDMGTNSW
SGRPGSKGDQGPKGDVGPRGEKGERGRDGMDGRPGPPGLPAASGDSIQYIPMPGPPGPPG
APGSPGIPGVSIAGSKGEPGMDSRSPYFGDPNYAGRTGSRSSLDELKQLRELKHHRDLED
STLGPPGPPGPPGAPGRGYYHDSSDEMPSSYGTNVRIVPGAVTFQSTEAMSKMSSTSPVG
TLAYIIDEEALLVRVNKGWQYIALGTLVPIATPAPPTTTVIPPPHRPDLQASNLINNIPQ
PIEGPSFTASPEYESWYPRMLRMGALNEPYSGDIQGIRGADYACYRQARRAGLLGTFRAF
LSSRITNLDTIVRIADRELPVVNTRGDVLFNSWNSIFNGQGGYFPQTPRIYSFSGKNVLT
DISWPQKLVWHGASALGERAMDTYCDAWHTASPDKVGMASSLLGNKLLDQDRYSCDNRFI
VLCVEALPHDQRRKRDTFSQTYEFTNEQEYSRHLAEVLQKS
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaagtattcctctgtatttgaaaggtggtttcaaaggctacctttcctgtggtttctg
ttgacccatgtaagatcatcgtccgtagcggcatcggagctggctttatttggtggtcag
gggatcagagatgttttcgcggagttcgacctgctgttggcgatcaaaatccccccggag
gagggcatcacgttcgtcgatggatcggatgggttcccggcgttcggcgtggcaccacat
gcggacatcaaatccccctacaggaccatcctgccggaaaagctgaccgagttcacgatc
atcgccaccgttcggcccggttcccgctccggtggctacgtgttcagtgtggtcaacccg
ttggacactgtggtccagctggggctgctgctggagccgattctggccaccgatcagtgg
aacatcacactgatctatacggacgccaacgtcgaacgggtcagtcagccgttggtgtcg
ttccagattccctacacgaagtcgtggatcaagttgatcttcaaagtgctgaacaaccag
gtagtgttctataataattgcgtagagacggagacggtggtggttaagaaggaaccacga
tcgttgacctttgacggggcatccacactgtatatagcccaagcgggcccgattttgaag
cggaatttcgagggaacgctactgttcctgaagctgtacggcaatccggagattgtcaag
acgcactgcaaccggacggcaaccgagctagacgattctagtaacgttatttatgaggag
gatgattttctgggagacagcgacggcgtcggaggagaaatatttgccgacagtttgtct
agtggagacgatgatgattcgttcgatctgccgatgatttcaccacccccaccggagtac
ggctaccggtccaagggcgagaagggcgagcgagggcccaaggggccaccaggcgatgct
atacgagggcctccgggaccaccgggtccccatggtccgccaggacctccggggccaccc
ggggctgccggtcccagagggcccggtttactcgacgaaggatccggcgacgatgcgaag
agattatcccagctcttcgacctgccgaccagcaatttcctcaataagtgctactgcaac
gtaaccgaagtcatagaggatttaaaacgtgacatcacccttcgcgagtaccttcgtggt
cccgaaggaccacaaggtcgcgagggaaaaacaggcacaccgggactgaccggagcaaca
ggaccccccggtgaacggggtgttggcggtcagaagggagacaaaggagaccgaggagag
cctggattacccggagtggagggtatccagggtagcaaaggtgaacccggcttggatggc
atgccgggtccagccggactacctggtactccaggacctccgggtatcccagagaatttc
gatatgagttggaatccatcgcggatgtttaaggaatcgatgctgggagcacccggtatc
caagggctgagaagcgcatcgccgggctcgaagggcgatccgggtgaaaagggtgacatc
ggccttgccggcccaaagggcgaacagggcagcaaaggggaacggggcgacccggggctc
atcggtgccaagggcgaaaggggtcacacatcgataggagcaccggggccaaaaggatcc
gttggtccaccgggagtgccgggcattcccggtcaaacgggatcgtcgggaacgaaagga
gacaaaggtggcatcggagatgtgggcccggcaggtcctcccggtccaccgggaatggtg
atatactcggatgcgaaaaactccaccggtggctcggattgtcactgccaaccagggcct
ccgggcgcaccaggaccacgtgggccaaccggcttcgatggaacaccaggactgccagga
gaaaccggtcttccaggtcacccaggcctacccggtgacaaaggcgataagggaagtgcc
ggcccgaaaggcgataaaggacccgaattcatcatcaacgaaaatgcctccttcaactca
tcccggtccagcagaggtgagaagggcgaacgggggccccgcggaaggcgcggaaaaccg
ggccccatcggaccaccgggcagaccggccggcccgagcgacatgggtaccaactcgtgg
tcgggacgaccgggatcgaaaggagatcaaggaccaaaaggagacgtggggccccgcgga
gaaaaaggcgaacgcggcagagacggaatggacggccggcccggtccaccgggtcttcca
gcggcatccggggacagcattcagtacattccaatgccgggtcccccagggccacctggt
gcaccgggatcaccgggcataccgggagtttccatagccggctcgaagggcgaaccgggc
atggattcacgcagcccctacttcggagatccgaactatgccggacgaacaggaagccgc
tcaagcttagacgaactaaagcagcttagggaactgaagcaccacagggatctagaagat
agtacgctcggaccaccaggacctccagggccaccgggtgcaccggggcgaggctactat
cacgacagcagcgacgaaatgccgtccagctacggcaccaacgtacgaatcgtaccgggg
gcagtaacattccaaagcaccgaggcaatgtcgaagatgtcttctacgagcccagtcgga
acgctcgcctacataattgacgaggaagcactgctggtgcgggtgaacaaaggctggcag
tatattgcgctcggcacactggtcccgatagcgacaccagcacccccaacgaccaccgtg
ataccgccaccgcaccggcccgacctgcaggcctccaatctgatcaacaacatcccccag
ccaatcgaaggcccatccttcacagcgtctccggaatacgagtcgtggtatccccgaatg
ctgcgaatgggagcgcttaacgaaccgtactcgggcgatatccaaggcatccgcggagcc
gattatgcttgctaccgacaggcgcggcgggccggcctcctgggaaccttccgggcgttc
ctgtcgtcgagaataaccaatctggataccatcgtacggatagcagatcgagagcttccc
gtagtgaacacccgaggcgatgtgttattcaactcgtggaatagtattttcaacggccag
ggtggctacttcccgcagaccccgcggatatacagcttcagtgggaagaatgtcctcacc
gacatcagctggccccagaagctggtgtggcacggtgccagcgccctcggcgagcgtgca
atggacacgtactgcgatgcgtggcacacggcctcccctgacaaggtcggcatggccagc
agtttgctcggcaataaattactggatcaggaccggtactcgtgcgataatcggttcata
gtgctctgcgtcgaggcgctaccccatgaccagcgaaggaagcgggacacttttagtcaa
acgtacgaattcactaacgagcaggagtacagtcgccatcttgccgaagtattgcagaaa
tcgtaa
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