Armigeres subalbatus: 134220314
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Entry
134220314 CDS
T09975
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
asua
Armigeres subalbatus
Brite
KEGG Orthology (KO) [BR:
asua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asua03019
]
134220314
Messenger RNA biogenesis [BR:
asua03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
134220314
3'-5' decay
Other 3'-5' decay factors
134220314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_19
ResIII
PAM2
AAA_14
AAA_22
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
134220314
NCBI-ProteinID:
XP_062555319
LinkDB
All DBs
Position
3:complement(224384489..224405105)
Genome browser
AA seq
2150 aa
AA seq
DB search
MTEESLASEHLRNRQWQKAKDIYDQILNTPPNDSRLSKERIIACLYGRTECCLELKQYDI
VAEDCHRLLRLLNSSDRVTDSASPIPSSASSSSSTSSSSSTQNNATATTESKVRKRLIHS
LFKQQKFVEAESILKEWSDNTTHHQDINRYLERLKSVLKMASANSSPTPAAGGVDQASNS
SVQPTTTDGTTPDSPVDSSTTPTSTISSLSSINDEYEQIETKLEHLIINNLPPDRYTKQL
DQIESNLRATFGNHEQSNGDSNGDSGRIDSSGSRDVHSSEKESASEDGNDMVDNKSTYNG
SDEINNSAQSNRSDNEDTSKESSGSENLSSNMTANSKSSPTSSSSVNSFQKQLDKITNIS
CVYCTLTFADRSELRAHCQTESHQNIIMSDEGRDWKWRPPPRGYTAESYALCENYLENQI
CHYGNQCVEAHGTDELNEWKERFQYRTKKLERARDKELYGKSYTEQLLERWVQAPSPDKV
MKERIEGVDESCSQDLVTTVSSKVSKREWTFVLKTRKLLKAVALLQDAHRNHFIIKQIYP
GVSKKMGQSSPSNRVIEAELTSDQEWVAALENKLSDQTNESGVMLEHRVKVVFSTDIYGT
FRQAVVFDLGSEPVLVKHLCVDVVPVTEVDKIQEIRKDIVMSTSERWDETNSEMIEFTTT
IIPHMYTPAYAADAEREKDLLARYPLPKATSFVLTQSTITEKKLTKNNYRNRIHELLYVE
EIARYEQIARYNLTTRLTIATNYLLTPSGMATSTAKYSHSGELFALMKLGKDVSEDTSAG
RLILNNCQAVLIASKDPVPSGEKRKVYEAVIEDKGKNMIYLKVSAKAVAGLGLKADTEFV
ADIQFQPNRLTYCEWHHAIDKIADFRIIFPDIYLEPSIPWTPQRQWDASLDPKLNSKQKE
AVVAVTTPINIALPPILLIGPFGTGKTYTLAQAIKQLLLQPESKILICTHSNSAADLYIK
DYLHPWVEEGMEEAKPLRVYYHKRWVATVNSIVQKYCLIDLNINVRNFRRPTVEDILKHR
IVVVTLNISMELASLDLPKGHFTHIFLDEAAQAMECEAIMPLALATEKTRIVLAGDHMQM
SPELFSNFAKERKLHISLLERLYDHYPNDFPCKILLCENYRAHEAITKFTSELFYEQKLI
ASGKQPRHEKFYPLTFFTTRGEDVQDKNSTAFYNNSEVYEVVERVCELRKKWPSSWGKIN
DQSIGIMTPYADQVFRIRSELRKRRMGGISVERVLNVQGKQFRAIFLSTVRTRRTCNTSS
NEGSKSSEDVDYGFLSNSKLLNTAITRAQSLVAVVGDPVALCSIGRCRKVWERFIEICYQ
NKSLFGITWSLLRSQLDGVELKKTYVLNPLAPEFIPRALQAEAYLREQAANVTGQFHQQS
THHAQHANNYHTQVNQNFPAGHSAGSGGGGGGPTNSMMRQIVPQQPLQQPQPPYIGHGPT
HGGHPPIQQQNQQQFSYQNPMFFYQQQQQQPQQQPLRGPPPHPNSLGPPVPPNIPQGPAA
FQPNTPANLWSAPGSGGHFPMVPSPGGRNTPPGWRMQQKNSAQPIRPQLAHNQHMQLTAS
GRPLIQPPLRSPVSQQQPLPAVPQMPYLQQPQNKNLQNFAPFTHHQAHPSTLGHHQQQQQ
QQQQQQQVQQQQQPHQLHQNHIRPILGGPISPSSYQQQQQQQQQTHQASIYTQQDPYLSN
LSNDLMASITARATQLQIPSAHAPQSLLHQQGQKLNPLRIDDRLDKDIQFLQNVHFPEKY
GQTSQSLQQQQQQLQSQQHHIQQQHQSHSNVVSSGSDFNHLLPPNMSFLDVALQSKEYQY
IWFIKLTETHGLDAANKFIDILRQVPTMASTSGHPNQQPQKKLNTMVPSQADQFLDNLLN
PNKDVLAPTNLQQPTILHQPQNASITNGNALLAGTGGTGKSLLENVDLFGNLSSSLQNDI
PLIGSNSSASSSQQSVPLYRRQAGQNYQNSTASSSNNQSIASSTPDLLDNHLQQSLFEAL
DTKLHSNNGSMMFNNQNPSQYGVGDQTSGFQGFPSIHNLAAGLMQHQHQQQQQQQQQQHS
LSSREFWHQLQQQQQQQQQQQQHHHQQQQQQHLLDNRGASVASTVEELLNRQNQTYASVL
SQAAGGGKQLSGLPKDGNGASDGSGGSGPVPFAALRDLGRKSNGFYNYFQ
NT seq
6453 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggagagcctggccagtgagcatcttcgaaaccggcagtggcagaaagcaaaa
gatatatatgatcaaatcctgaatacacccccaaatgactcaagactatcgaaggagcgc
atcatcgcgtgtctctatggaagaactgaatgttgtctagaacttaagcagtacgacatc
gtcgcggaagattgccatcgtctactaagactgctgaatagttcagatcgtgtcaccgat
tcggcgagtccgatcccgtcatcggcatcgtcgtcttcctcgacttcgtctagttcttca
acgcaaaacaatgcaaccgctacaacagaatcaaaagtaaggaaacggcttatccactct
ttgtttaaacagcaaaagtttgttgaagccgagagcatccttaaggaatggtctgacaac
accacccaccaccaggacatcaatcggtatctggagcgtctgaagtcggtgctgaagatg
gcatccgctaattcttcacccactccagcggcaggcggagtagatcaagcatcaaactcc
tctgtgcagccgacgacaacagacgggacaacacccgattcgccggtagattcctccact
acaccaacttcaaccatttcctcgctttcatccataaacgatgaatatgagcagatagaa
accaaattagagcaccttatcatcaataacctccctccagatcggtacaccaaacagttg
gatcagatcgaaagtaatctacgcgcaacgtttggaaaccacgaacaatctaatggcgac
agtaatggggacagtggcagaattgactcatctgggtctagggacgtccactccagcgag
aaagaatctgcatctgaggatggcaatgacatggtggacaacaagtccacctataatggc
agcgacgaaatcaacaacagcgcccaaagtaaccgaagcgacaatgaagacacgtcaaag
gaatccagcggaagtgaaaatctatcgtcgaatatgactgctaattcgaagtcatcgcca
acaagctcgtccagcgtgaacagcttccaaaaacagctcgataagatcaccaacatcagc
tgcgtttactgtacgctcaccttcgcggaccgttcggagctgcgagcacattgtcaaacg
gaaagccatcagaacattattatgtcggatgaaggacgtgactggaaatggcgtccacct
ccacgaggctacacagcggaatcatacgcattgtgtgaaaattatctggaaaaccaaatt
tgccactacggcaatcagtgcgtcgaagcgcatggaacagacgaactgaatgagtggaag
gaacgtttccagtatcgcacgaaaaaactggaaagagcgcgtgacaaagaactgtatggg
aaaagttacaccgaacagctgctggaacggtgggttcaggcacctagtcccgataaagtg
atgaaagagagaatagaaggcgtggatgagtcttgctcccaggatctcgtaaccacggtg
agctctaaagtgagcaaacgggagtggacatttgtgttgaaaacacggaagttgttgaaa
gcggtagcactgctccaagatgctcaccggaatcactttattatcaagcagatttatccc
ggcgtgagtaagaagatgggtcaatcctctcctagtaatagggtgattgaagcagaactg
acgtccgatcaagaatgggttgcagctttggaaaacaaactcagcgatcaaacgaacgag
agcggtgtcatgttggaacatagagtgaaagttgtcttcagcacggatatctacggaacg
ttccgacaggcggtagtattcgatttgggaagtgagccggtacttgtgaaacacctgtgc
gtggacgtggttcctgttacagaggtagacaagatacaagaaatccggaaagatattgta
atgtctacttcggaacgatgggacgagaccaattcggagatgatagagttcacaacaacc
atcatccctcatatgtatactccggcctatgctgcggatgctgaacgtgagaaggacttg
ctggcaaggtatcctctgccgaaggcaacatcttttgtactgacgcaatctaccatcaca
gagaaaaagctgactaagaacaactacagaaaccgcattcatgagcttttgtacgtggaa
gaaatcgcccggtatgaacaaatagctcggtacaatctcaccactagattaacaatagca
actaactatctgttgacaccgagtggcatggccaccagcacagccaaatattcccattcg
ggtgaattattcgcgctcatgaaactcggaaaagatgtgtcggaagacacctccgctggc
cgtttgattttgaacaattgccaggctgtactgatcgcgtcgaaagaccccgttccttca
ggagagaagcgcaaagtttatgaagccgttattgaggacaagggcaaaaatatgatttac
cttaaagtatcggctaaagctgttgcaggtctcggactgaaagcggacaccgaattcgta
gccgatattcagtttcagcccaatcgtctcacatactgtgagtggcatcatgcgattgac
aaaattgccgatttccgaataatttttccggacatctaccttgaaccgagtattccctgg
acaccgcagcgccaatgggacgcatctttggatccgaagctgaactccaaacaaaaagaa
gctgtagttgcagtgacaacacccatcaatatcgccttaccgccgattctgctgattggg
cctttcggaactggtaaaacgtacacactggcacaggcaatcaaacagctgctgctgcag
ccggagtcgaagattctcatctgcacccactccaactcggcagcggatttgtacatcaag
gattatctgcatccgtgggttgaggaaggcatggaagaggccaaaccgttgcgggtctac
taccacaaacgatgggttgctacggtcaacagcattgtgcagaagtattgcctaatagac
ctgaacatcaatgtgcgcaactttcgccgaccaacggtggaggatattctgaaacatcgc
atcgtcgttgtaacgttgaacatttcgatggaactggcgtccctggatttgccgaaggga
cattttacccacatattcctcgatgaagccgcacaggcgatggagtgtgaagcgatcatg
ccgctggcgcttgccaccgaaaaaactcgcatcgttctcgctggcgaccacatgcagatg
tcaccggaactgttttccaactttgccaaagagcgaaagttgcacatttctctgttggag
cgtctgtacgatcactatccgaatgattttccttgcaagatcctgctgtgcgaaaactat
cgagcacacgaagctattaccaagtttacgtcggaactgttctatgaacagaagctgatt
gcatcgggtaagcaaccgcggcatgagaagttttatccactgacatttttcacaacgcgc
ggtgaggatgtgcaggacaagaactcgacggctttttacaataactcggaagtgtacgag
gtagtcgagagggtttgcgagttacgtaaaaaatggccgagctcgtgggggaaaatcaac
gatcaaagcataggcataatgacaccatatgcagatcaagtttttcgtattcgttcggag
ttgagaaagcgtagaatgggagggataagcgtggaacgtgttttgaacgttcagggtaaa
cagttccgagcgatatttttgtccaccgtgagaacgagaagaacttgcaatacttcttct
aatgagggcagcaaatcctccgaggacgttgattatggatttctgagcaattcgaaactg
ttaaatacagcgataacgcgtgcccagagtttggtagccgtggttggagatccggtagcg
ctgtgctcgataggacgctgtaggaaggtttgggaacgttttatagagatatgctatcaa
aataagagtttatttggaattacttggtccttgttgcgctcgcagttggatggggtagag
ttgaagaaaacttatgttctgaatccacttgcaccagaattcataccgcgtgcattgcag
gccgaagcatacctacgagaacaggcagctaatgtaactggacagtttcatcagcaatca
acacaccatgcccagcatgccaataactaccatacgcaagtgaatcaaaatttcccggcc
ggacatagtgctggtagtggagggggaggaggcggtccaaccaacagcatgatgcgacag
atcgttccacaacaaccattacaacaaccgcaacctccttacataggtcacggtccaact
cacggaggacatccacctattcagcagcaaaaccagcagcagttttcatatcagaatcca
atgttcttctaccaacaacagcagcaacaaccgcaacaacagccactgcgaggtccacca
cctcatcctaattctctgggacctcctgtgccacccaatatcccccaaggacctgccgca
tttcagccaaacactcccgcaaatctgtggagtgcccctgggtctggtggacattttccg
atggtaccttcccctggtggtcgtaataccccgcctggctggcgaatgcaacaaaaaaat
tctgctcaaccgattcgcccacagttggcccataatcagcacatgcaactaacggcaagc
ggcaggccacttattcaaccgccattaaggagtcctgtatctcaacagcaaccgctacct
gctgttccacagatgccttatcttcagcaacctcaaaacaaaaatttgcagaactttgct
ccatttacccatcatcaggctcacccctctactcttggccaccatcaacaacagcagcag
cagcagcaacaacaacaacaggtccaacaacaacagcaaccccatcaactgcatcaaaat
cacatacgacctatccttggcggtcccataagccctagttcctaccaacaacagcagcag
caacaacaacaaacccatcaggcatctatctacactcagcaagatccatatctgtcgaat
ctttcgaatgatctgatggcttcaataacagcgagagccacccagctacaaataccttcg
gcacacgctccgcaaagtttgctacatcaacaaggtcagaaattaaacccactgcggata
gatgaccgcctcgacaaagacatacaatttcttcagaatgtacattttccagaaaagtac
ggtcagacgtctcaatctttgcaacaacaacaacaacagcttcagtcccaacaacaccac
attcaacagcaacatcaatctcattctaatgtggtaagttcaggttcagattttaatcat
ttgctaccgcccaacatgagcttcctggatgtagctctccagagcaaagaataccaatac
atctggtttatcaagctgacagaaacccatgggcttgatgctgcaaacaagtttatcgac
atccttcgacaggttccaacaatggcatctacatcagggcaccccaaccaacaaccgcag
aagaagctcaacacgatggtaccatcccaagctgaccagtttctcgataacttattgaac
cccaacaaagacgtactggcaccgacgaaccttcaacagccgaccattctgcaccaaccc
cagaacgcgtccattacaaatggaaatgctctgctagcaggaacaggcggcaccgggaaa
agcttgctcgagaacgtggacttgtttggaaatctttcatcgtcgttgcagaacgacatc
ccactgattggttcaaactcgtcggcgtcgtcttcgcagcagtccgttcccttgtaccgt
cgacaagccggtcaaaactaccagaacagcaccgcatcttcgtccaacaaccaatcaata
gcatcatctacaccggatctgttggataatcatctgcaacagtcccttttcgaagctttg
gataccaagctacattctaataatggcagtatgatgttcaacaatcaaaatccgtctcaa
tatggagtcggggatcaaacaagtggtttccaggggtttccatcaatacataatctggcg
gcaggactgatgcagcatcagcaccaacaacagcaacagcagcagcaacaacagcacagc
ctcagcagccgtgagttctggcatcaactacaacaacagcagcagcagcaacaacagcaa
caacaacatcaccatcaacagcagcagcagcagcatttgcttgacaatcgcggcgcttct
gtcgccagcacggttgaagagctgttgaaccgtcaaaatcaaacgtacgctagtgtgctg
agccaggctgcaggtggaggcaaacagctgtcgggtctcccgaaagatggtaacggagcg
agcgacggcagcggcggatcgggtcctgtcccgttcgccgccctgcgagatctaggccgg
aagagcaacggtttttacaactactttcagtag
DBGET
integrated database retrieval system
