Armigeres subalbatus: 134222164
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Entry
134222164 CDS
T09975
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
asua
Armigeres subalbatus
Brite
KEGG Orthology (KO) [BR:
asua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asua03019
]
134222164
03041 Spliceosome [BR:
asua03041
]
134222164
Messenger RNA biogenesis [BR:
asua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
134222164
Spliceosome [BR:
asua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
134222164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
COA8
RRM_7
Cytochrom_C552
HAM1_N
TFIIA
VPS13_N
Motif
Other DBs
NCBI-GeneID:
134222164
NCBI-ProteinID:
XP_062557295
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All DBs
Position
1:15516349..16417119
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AA seq
486 aa
AA seq
DB search
MLAMSTLMMPAPTMALSAAPQLTVGPPHKPPETKLLTIHPAHSAQSQTTPQHQLHQQHQQ
VQQQQQQQAAQQQAAQQQAAAAVQQQQAQQQQQQLQQQLAATVKQEMSSSYHWHLPPASS
GNAVVKMPWKTSTMTATAAATTTTAGMGITTTVRHHGSNENLEHYHIFVGDLSPEIETQT
LKDAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKKSEAENAIAAMNGQWLGSRSIRTNW
ATRKPPATKAELNAKPLTFDEVYNQSSPTNCTVYCGGVGGTLAGGLSEEILQKTFSPFGT
IQEIRVFKDKGYAFVRFSTKEAATHAIVAVHNSEINAQTVKCSWGKESGDPNNAPSLASQ
ALSQAGFPFNTAYGQQVAGYWYPPAPTYPTTPAPAAAPLQGQFLQGMQGYTYGQFAGYQQ
GYMGMGMQLPGAWPGVPTQAQIPATAQQLAQAGVGGALPQAAGVVAYPMQQFQLADDEWL
APSLLV
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgttggccatgtccaccctgatgatgcccgcaccgacgatggccctcagtgccgccccc
cagctgaccgtgggaccgccgcacaaaccgccagaaacgaaactgctcacaatccacccg
gcccattcggcccaatcgcagaccaccccgcagcatcagctgcaccagcagcaccagcag
gtccagcagcagcaacagcagcaggcggcgcaacagcaggccgcccagcagcaggccgcc
gccgcagtccagcagcagcaggcccaacagcaacagcagcaactgcagcagcagctggcc
gccaccgtcaagcaggaaatgtcctcgtcgtaccactggcatctgcccccggcgagcagt
ggaaacgcagtcgtcaagatgccctggaagacgtccacgatgacggcaacggcggcggcg
acgacgacgacggcggggatgggcatcacgacgacggtgcgacaccacggttctaatgag
aacttagaacattatcacatatttgtcggcgatctcagcccggaaatcgaaacgcagaca
ctgaaagatgccttcgctccttttggggatatatcagattgccgcgtggtccgggatcca
cagacgctgaaatccaaaggctacggcttcgtgtcgttcgtgaagaaatcggaagcggag
aatgcaattgctgccatgaatggacaatggctcggatcgagatccattaggacaaactgg
gccaccagaaaacccccggctaccaaggcagaattgaacgccaaaccgctcaccttcgac
gaggtctacaaccagagcagtccaaccaactgcaccgtgtactgcggcggcgtcggtgga
actctggccggtggactaagcgaggagatcctgcagaagacgttctctccgttcgggact
attcaggagattcgcgtcttcaaggacaagggatatgcttttgttagattctccaccaag
gaagcggccacccacgccatcgttgctgtacacaactcggaaatcaacgctcaaacggtc
aaatgctcctggggtaaggaaagtggcgatccgaacaacgcaccctcgctggcgagccaa
gcactgagtcaggccggattccccttcaatacggcctacggtcaacaggtcgccggctat
tggtacccgcctgctccgacctacccgacgacaccagccccggccgctgccccactgcag
ggccagttcctccagggtatgcagggctacacgtacggacagttcgccggctaccagcag
ggttacatgggaatgggaatgcagctgcccggagcctggcccggtgtaccaactcaggcc
cagatccctgccaccgctcagcagctggcacaggccggcgttggtggagcccttccgcaa
gccgccggcgttgtcgcctatccgatgcagcagttccagttagctgacgatgaatggcta
gcacccagccttttagtgtag
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integrated database retrieval system
