Armigeres subalbatus: 134225169
Help
Entry
134225169 CDS
T09975
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
KO
K15542
polyadenylation factor subunit 2
Organism
asua
Armigeres subalbatus
Pathway
asua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
asua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134225169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asua03019
]
134225169
Messenger RNA biogenesis [BR:
asua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
134225169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR3_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
eIF2A
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR41
Beta-prop_WDR11_2nd
PEP5_VPS11_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
134225169
NCBI-ProteinID:
XP_062561009
LinkDB
All DBs
Position
3:121818458..121876998
Genome browser
AA seq
986 aa
AA seq
DB search
MEFSQPPPDPMGGGSYANPPPINRILSYQNPQSQKPQHNFYHHRPYHHFNGFRGGLPMTQ
DDFDGKRLRKSVMRKTVDYNASIIKALETRTWTRDYRDRRALQPENIYIPELLPPPSYMD
NPTNAVTTRFVKTATNKMRCPIFTLAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAH
DVSVRTMVWSHNDNWMVTGDHSGYVKYWQSNMNNVKMFQAHKEPIRGISFSPSDAKFASC
SDDGTVRVWDFLRCQEERVLRGHGADVKCVHWHPQKALIVSGSKDNQQPIKIWDPKSNVA
LATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFDLRNLSEEVQIFRGHKKEASAVSWH
PIHEGLFASGGSDGSILFWNVGTDKEVGGIDNAHESIVWTLAWHPLGHILCSGSNDHTIK
FWTRNRPGDQMRDKYNLNTLPASLAGLDECELDDHVVIPGMGPEDKIDIADSLGTNNNGV
IPGLDFANVTNFNEKMREKKIPYSKPIPRNFQAQWNEASKYEEHRETSEEIKEVISQIAE
STPGILPIKKMAPSAVILYDRVIPILPDSDLEAVILEGPTSLNRFILMGRIPELQDMIPP
IDEDDFNNLDNSRIKMEIDPTFIYNKTTVIEPSEPPEATEPLLSSTSLMKRRTPPPPAPD
PTAGIPSLLQLDIFPPPDIKFSTDEVEDEMALRNSKKGREREKQKEKERREQEEEKKFWA
EHNEKNWDEEDMGNGDYPSSRRSPIESHNTNSNGQWTTSKYSTLDDDGTGLGGNSWELEA
DRHSTLGGDTSKDNNSRDGFGFGSQQANSNFNPAPPNFGAPNNFSSANFNSGPNTFGPGG
PNNFNHRPNSFNSGPNTFGGGQGPNTFGPGPNNFNPNNFNPNVPPGMPPNFNSGPPPNFN
SGPPPGNFNFNGPPPGGFNNNFGSGPPPNNFNNFGNNGGNFGPDHGGNNDDGGWNSNNRG
GNRNRSNMRGGRGNQRGGFRGGNRRN
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggagttttcgcaacctccaccagatccaatgggaggcggaagctatgccaaccctccc
ccaatcaatcgtattctgagctatcagaatccacaatcgcagaagccccagcataacttt
taccaccaccggccgtatcaccacttcaatggttttcgtggtgggcttcccatgacgcag
gatgattttgatgggaaacggcttcggaaatcggtgatgcgaaaaacagtcgattacaat
gcatcgatcatcaaagcgctggagactcgcacttggacaagagattaccgagatcgacgc
gcccttcagccggagaatatctacataccggaactgctgccaccgccaagctacatggac
aaccctactaatgcagtcacgacccgtttcgtcaaaacagccaccaataaaatgcgttgt
cctattttcacccttgcatggactccggaagggcgtcgtctcgtaacgggtgccagttcc
ggcgaattcacactttggaatggacttactttcaactttgagactattctacaggcccat
gatgtctctgtgcggacgatggtgtggtctcacaacgacaactggatggtgacgggtgac
cacagtggttatgtcaaatactggcaatcgaacatgaacaacgtaaaaatgttccaggcg
cataaagaacccatccgtggaatcagctttagcccgtcggatgccaaatttgccagctgt
agcgatgatggtacggtacgtgtctgggatttcctccgatgccaggaggaacgtgttctg
agaggtcatggtgctgatgtaaaatgtgtccactggcatccgcaaaaagcgttaatcgta
tccggaagtaaggataatcaacagccaatcaaaatctgggatccaaaaagtaatgtagcg
ttagctactttgcatgctcacaaatcgactgttatggatttgaagtggaacgacaatggt
aattggttggtcacagcttcgcgagatcatttgctaaagctgttcgatttgcgaaacctc
agcgaggaggtgcaaatcttccgaggtcacaagaaggaagccagcgccgtatcgtggcat
ccgattcacgagggcttgtttgcttcaggtggatccgacggatcaattctgttctggaac
gttggcactgataaagaagtgggtggaatcgacaatgcccacgagagcatagtgtggacg
ttagcgtggcatcctctaggtcatattttatgttccggatcgaatgaccacacaatcaaa
ttttggaccagaaatcggcccggtgatcaaatgcgagacaaatacaatctcaacacgctg
ccggccagtttggctggtttggatgaatgcgagctggacgaccacgtggtcattccgggt
atgggacctgaggacaaaatcgacatcgccgatagtttaggaaccaacaacaatggcgtc
attcccggtctggacttcgccaacgtaacgaatttcaacgaaaagatgagggaaaagaaa
attccgtacagcaagccgattccgcgtaatttccaggcccaatggaatgaagccagcaag
tacgaagaacatcgcgaaacgtcggaagaaatcaaagaagtcatatcgcaaatcgccgaa
agtactccgggaatattaccgatcaaaaagatggcaccttctgcggtcatcctgtatgat
cgagttatacccattttacctgattccgatttggaagccgttatacttgaaggccccacg
tctttgaataggttcatccttatgggaaggatcccggagcttcaagatatgataccgcct
atcgacgaagatgatttcaataatttggacaactccagaataaagatggaaatcgatcca
acattcatctacaacaaaacgaccgtgatcgaaccttcggaacctccggaagcaactgaa
ccgctgctctcgtccacatcgttgatgaaacgaagaactccacctccacctgctccagat
ccaactgcgggtatcccgtcactattacagctggacatattccctccgccagatataaag
ttcagtacggatgaagtcgaagacgaaatggcgctacggaatagtaagaaaggtagagaa
cgggagaagcagaaggaaaaggaacgccgggaacaggaagaggagaaaaagttctgggct
gaacataatgagaagaactgggacgaagaagatatgggaaacggtgattacccatcttcc
aggaggtcccctatcgagagtcataacacaaatagtaacggacaatggaccacatcaaaa
tatagtacgctcgatgacgatggtaccggcctgggaggaaactcgtgggaattggaagcc
gatcgccattctacattgggcggtgatacaagcaaagataacaacagcagggacggtttt
gggtttggtagccaacaggcaaattccaatttcaatcctgctcctccgaacttcggcgct
ccaaacaatttttcttccgcaaacttcaattcaggtccgaatacttttgggccaggtgga
ccgaacaatttcaaccacaggccgaacagtttcaactccggtccaaacacgttcggtggt
ggtcaagggccaaatacgttcgggcctggccccaacaacttcaacccaaacaacttcaac
cccaacgtccctccaggcatgccgcctaacttcaactcaggaccgccccctaatttcaac
tctgggccaccgccgggcaacttcaacttcaacggtccgccacccggtggtttcaacaat
aacttcggctctggtcctccgccgaacaatttcaacaattttggtaacaacggtggcaat
ttcggtccggatcacggaggcaacaatgacgacggtgggtggaatagtaacaaccggggt
ggtaaccgcaacagaagcaacatgagaggtggccgaggtaatcaacgaggggggttccga
ggtggtaatcgaaggaactga
DBGET
integrated database retrieval system
