Armigeres subalbatus: 134225244
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Entry
134225244 CDS
T09975
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
asua
Armigeres subalbatus
Pathway
asua03022
Basal transcription factors
asua03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
asua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134225244
09124 Replication and repair
03420 Nucleotide excision repair
134225244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asua03021
]
134225244
03400 DNA repair and recombination proteins [BR:
asua03400
]
134225244
Enzymes [BR:
asua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
134225244
Transcription machinery [BR:
asua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
134225244
DNA repair and recombination proteins [BR:
asua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
134225244
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
TniB
IATP
Motif
Other DBs
NCBI-GeneID:
134225244
NCBI-ProteinID:
XP_062561140
LinkDB
All DBs
Position
3:310662567..310665335
Genome browser
AA seq
812 aa
AA seq
DB search
MGPPKKYSKKDRAGTSGGGSTTGGFVENRWNKKRRPEDEAYSTFANDDDDSNMDAAGGEF
VPEAASKNAEKIDEGIQEDEYGAKDYRSQMELKPDNASRPLWVAPNGHIFLESFSPVYKH
AHDFLIAISEPVCRPEHIHEYKLTAYSLYAAVSVGLQTHDIIEYLKRLSKTTVPEGIQEF
IRLCTLSYGKVKLVLKHNKYFVESPHPEVLQKLLKDPVIQSCRLRRTNEEGDGFITQTIE
KKGITAFGTTKVGPTTTVPAATEGDKPAEAETAVAVPDDITNFYDKMDNEEEEEEANLNT
VSFEVNQEKIEVLQKRCIEIEFPLLAEYDFRNDTINADINIDLKPAAVLRPYQEKSLRKM
FGNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGVSVEQWKQQFKMWSTADDS
MICRFTSEAKDKPMGCGILVTTYSMITHTQKRSWEAEQTMRWLQEQEWGIMVLDEVHTIP
AKMFRRVLTIVQSHCKLGLTATLLREDDKIADLNFLIGPKLYEANWLELQKRGYIARVQC
AEVWCPMAPEFYREYLVTKTSKKMLLYVMNPAKFRACQYLIRYHEKRGDKTIVFSDNVFA
LKHYAIKMNKPYIYGPTSQSERIQILQNFKFNPKVNTIFVSKVADTSFDLPEANVLIQIS
SHGGSRRQEAQRLGRILRAKKGAIAEEYNAFFYTLVSQDTLEMGYSRKRQRFLVNQGYSY
KVITHLAGMDSDTDLFYKTRDEQGQLLQQVLSATDMDCEDEKIPGEGSGAPRPGGSKRTG
GLSSMSGADDAVYMEFRKKKEHLHPLFKKFRG
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgggtccgccaaagaaatactccaaaaaggaccgcgccggcaccagtggcggaggttcc
accactggtggtttcgtcgagaacaggtggaacaaaaagcgccgaccggaggacgaggcc
tattcaacgttcgccaacgacgacgacgacagtaacatggatgctgcgggtggggaattc
gtcccagaagccgcgtccaaaaatgcggagaaaatcgacgaaggtattcaggaagacgag
tacggtgccaaggactatcgctcgcagatggaactgaagccggacaacgcttcgcgtccg
ctctgggtggcaccgaatggtcacatttttctggaatcgttttctccggtttacaaacat
gcccatgattttttgattgctatttccgagccagtttgccgaccggaacacattcacgag
tacaagctgacggcctacagtctgtacgctgcggtatccgttggtcttcaaacgcacgac
attattgagtacctgaagcgcctaagcaaaacaaccgttcctgagggcattcaggagttc
atacgactgtgtacgctctcttacggaaaggttaagcttgtattgaaacacaacaagtac
tttgtcgaaagccctcatcccgaagttctacagaaacttctaaaggatccggttattcag
tcgtgccgtttgagacgcaccaatgaagagggcgacggttttatcacacaaaccatagaa
aagaaaggtatcaccgcgtttggaacaaccaaggtcggtccaacaacgactgttccggca
gcaactgaaggagacaaaccggctgaagctgaaacggctgttgccgttccggatgatatt
acaaacttctacgataaaatggataacgaggaggaggaagaagaagcgaaccttaatacg
gtttcgtttgaggtcaatcaagaaaagatcgaggtcctgcagaagcgctgcatcgaaatt
gagttccctctgctggcggagtatgacttccgcaacgatacaatcaacgcagacataaat
atcgatttgaagccagcggctgtgttgcgtccgtatcaggagaaaagtttaaggaagatg
ttcgggaatggtagagcccgctcgggggttattgtcctgccttgcggtgcaggtaaatcg
ctggtcggggtaacggcctgttgtacggttcgtaaacgtgctttggtgctttgcaacagt
ggtgtctctgtcgaacaatggaagcaacagttcaagatgtggtccacggctgacgacagt
atgatctgccgattcacttcggaagcgaaggataagccaatgggatgcgggatcctggtc
acaacgtactctatgattactcacactcagaagcgatcgtgggaagcggaacaaaccatg
cgctggcttcaggaacaagaatggggcatcatggtcctggatgaagtacataccattccc
gctaagatgttccgaagggtgctgacgatcgtccagtcccactgcaagcttggtttgaca
gccaccttgcttcgtgaagacgacaaaattgctgatctgaattttctcatcggacccaaa
ctttacgaagctaactggttggagctccagaagcgaggctacattgccagggtgcagtgt
gccgaagtatggtgccccatggccccggagttctatcgggaatatctcgtaaccaagact
tccaagaagatgctgctgtatgtcatgaatccggccaagtttcgagcttgtcagtatctc
atccgttaccacgagaagcgtggtgataaaaccatcgtattcagcgacaatgtgttcgcc
ctcaagcactacgcaatcaaaatgaacaaaccttacatctatggacccacctcacagagt
gaacgtattcaaatcttacagaacttcaaattcaacccgaaagtcaataccatctttgtc
agtaaggtcgccgataccagtttcgatttgccggaagcgaacgtgctcattcaaatttca
tcgcacggtggttcccgtcgccaggaagcgcagcgtctcggtcgtattctccgtgccaag
aaaggagccatcgcggaggagtataacgcattcttctatacgttggtctcgcaggatacg
ctggagatgggttactcccggaagcgacagcggttcttggtgaaccaaggctacagctac
aaggtgattacccatctggccggaatggacagcgatacggacttgttctacaagacacgc
gacgagcagggacagctgctgcagcaggttctctccgcgacagacatggattgcgaagac
gagaagattcccggggaaggatcgggagccccacgaccgggaggttctaagcgtaccggt
ggacttagctcgatgtccggtgcggacgatgctgtttacatggagttcaggaagaagaaa
gagcatctgcatccgctgttcaagaagtttaggggataa
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