Armigeres subalbatus: 134225812
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Entry
134225812 CDS
T09975
Name
(RefSeq) exosome complex exonuclease RRP42
KO
K12589
exosome complex component RRP42
Organism
asua
Armigeres subalbatus
Pathway
asua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134225812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asua03019
]
134225812
Messenger RNA biogenesis [BR:
asua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
134225812
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
134225812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
134225812
NCBI-ProteinID:
XP_062562159
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All DBs
Position
3:221630963..221632084
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AA seq
299 aa
AA seq
DB search
MANVLLSEAEKTYILHGIQKDYRNDGRTNRDYRPMELETDVVVHAMGSARLRLANTDILV
AVKADIDIPSPNRPKEGKLEFFVDCSANATPDFEGRGGEELATEISNTLSKAYLSQQAFD
LTPLCILAKHQCWKLYVDILILECGGNLFDAVSLAVKAALYNTKLPRVSSAELDGGAMDI
ILSDDPYDCERLNIDAAPLLVTVCKIGDCCVVDPSAEEEECSAISVVIGVSRKKGNKSSV
TSIRTSGEGSFHSDTLMKSLDLGVSAAAYLDKALMAALKADEENNTKPLGEKEIFGFLK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgttctgttaagcgaagccgaaaagacatatattctacatggaattcagaaa
gattaccgcaatgacggccgaacgaaccgtgattaccgcccaatggaactggaaacggat
gttgtcgtacatgcaatgggttcggctagactgcgcctggcaaacacggatatactcgtg
gctgtgaaggccgacatcgacattcccagccccaatcggccaaaggagggtaaactcgag
ttctttgtggactgttcggccaatgccacgccggatttcgagggacgtggcggcgaagag
ctggccactgaaatatccaacacactgtcaaaggcgtacctttcccaacaagcgttcgat
ctgacgccgctgtgtattctggctaagcatcaatgctggaaactttacgtggacatcctg
attcttgaatgcggtggtaatcttttcgatgccgtgtccctggccgtcaaggcggctctc
tacaatactaagcttccccgggtgtcctcggcggaattggacggaggggctatggacatc
atactgtccgacgacccgtatgattgcgaacgattgaatattgacgctgccccactgctg
gtgactgtgtgcaagattggagactgctgtgtggttgatccttcggcagaagaagaggag
tgcagtgcaatcagcgttgtgattggcgtatcgcgtaaaaagggtaataagtcatcagtc
acgtcgatccggacttctggtgaaggctctttccattcggatacgctgatgaaaagcttg
gacctaggggtaagtgctgcagcttatttggacaaagccctaatggccgcgttgaaggcc
gatgaagagaataacaccaagccacttggggaaaaggaaatatttgggtttttgaaatag
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