Armigeres subalbatus: 134225878
Help
Entry
134225878 CDS
T09975
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
asua
Armigeres subalbatus
Pathway
asua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134225878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asua03041
]
134225878
Enzymes [BR:
asua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134225878
Spliceosome [BR:
asua03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
134225878
Complex B
134225878
Complex C
U2 SnRNP specific factors
134225878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
AFOR_N
Motif
Other DBs
NCBI-GeneID:
134225878
NCBI-ProteinID:
XP_062562293
LinkDB
All DBs
Position
3:342673631..342692183
Genome browser
AA seq
804 aa
AA seq
DB search
MSGNRGNFSFSMRRPGQLSGSFRPGQQQQQQSQQKSFSLNAVPPPSSLTGRGHGGYAPPK
FFHQQQQSAGGVSKHGYHTMDAIAAYANPASQYSLGKRRGKTEDDYFDDDDESGPQLDYI
PAPGSPSASGSQAKSDDEDDEDDPLDAFMAGINAQVEREKKKIPQPNVDAKKGTRGDIDD
VDDEESYYRYMEENPTAGLQDADGSDAELEYDEDGNPIPPPKKREIDPLPPIDHSEIEYD
KFEKNFYNPHEDIAGLTVSKTRDLRMKLGVRVNGPAPPAPVTSFAHFGFDEQLMKAIRKS
EYTQPTPIQAQGVPAALSGRDIIGIAKTGSGKTAAFLWPMLVHIMDQKELGPGDGPIGLI
LAPTRELSLQIYQEAKKFGKVYNISVCCCYGGGSKWEQSKALEQGAEIVVATPGRMIDMV
KMKATNLQRVTYLVLDEADKMFNLGFEPQVRSICNHVRPDRQTMLFSATFKKRIEKLARD
VLTDPVRIMHGDLGEANEDVTQHVIVMNNPAHKWNWLLAKMVQLLSEGTVLIFVTKKADA
EQVANNLRLQEYDPVLLHGDMDQADRNIVITRFKKREVEIMVATDVAARGLDIPHIRNVV
NYDIARDIDTHTHRVGRTGRAGEKGTAYTLVVDKDKEFAGHLVRNLEGANQEVPEELMKL
AMQSAWFRNSRFKNNNKGKNLNVGGAGLGFRSRPVPSGPLKALEGPSSSADGGSGSGWKG
PVTDRLTAMRDTFKAQYNAQFKASSDRTWENTLPEGGVFAKPTMSGFVPASNRDAQEELQ
KDDEQHFSQTGDEDRPRKKKSRWN
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcaatcgtggaaatttcagtttttcgatgcgtcgccccggacagctgtcggga
tcattccgtcccgggcagcagcagcaacaacaatcgcagcagaaaagtttttcgctgaat
gccgttccgccgcccagttcactgaccggccgtggccacggtggttatgctcctcctaag
ttcttccatcagcagcaacagtcggccggtggggtttccaagcacggctaccacaccatg
gatgcgattgcggcctacgctaatcctgcctcgcaatattcgctcggcaagaggcgcgga
aagaccgaggatgattatttcgacgacgatgatgagtccggaccgcagctggattatatc
ccagcgcctggatcgccttcggctagcggatcgcaagccaagtctgacgacgaagatgac
gaggacgacccattggacgcgtttatggctggcatcaatgcgcaggtggagcgcgaaaag
aagaaaattcctcaaccgaacgtggacgccaagaaaggaacccgaggggacatcgacgat
gtggatgacgaggagagctattaccgttacatggaagagaacccaactgccggtctccag
gatgcggacggttccgatgccgaactggagtacgacgaagatggaaatcccatcccgcca
cccaagaaacgggaaattgatccgttgcctccgattgatcactcggaaatcgagtacgat
aagttcgagaaaaacttctacaacccacacgaggacattgcgggtctgaccgtgtcgaag
accagagatctccgtatgaagcttggggtcagggttaacggtcctgccccgccggctccg
gttaccagttttgcccacttcgggttcgacgaacagttgatgaaggccatccgcaagtcg
gagtacactcagccgacgccgatccaggcccaaggcgtaccggcggcactgagtggtcgt
gatattatcggtattgccaaaacgggtagcggtaagacggctgcctttttgtggccaatg
ctggttcacattatggaccagaaggaacttgggcctggcgatggaccgattgggctgatt
ctagcgccaacgcgcgagttgtcgctgcaaatctatcaagaagccaagaagttcggcaag
gtttataatataagcgtttgctgctgctacggtggtggctcaaagtgggagcagagcaag
gcactggaacagggtgctgagattgtagtggccactcctggtcgaatgattgatatggtg
aagatgaaggccacaaacttgcaacgagttacctatctggtactggacgaagccgataaa
atgttcaatctcggcttcgaaccacaggttcgttcgatctgtaatcatgtccgtccagat
cggcagacgatgctgttcagtgctactttcaagaagagaatcgagaagctggcacgggat
gttttgaccgatccggttagaataatgcatggagatttgggtgaggcaaatgaagatgtc
acacagcatgtgattgtgatgaacaatcctgcgcataaatggaactggcttctggcaaag
atggtacagctgttatctgagggtactgttttgattttcgttacaaagaaggcagatgcc
gaacaggtcgccaacaatctacgcctacaagagtacgatcctgtattattgcatggtgac
atggaccaagctgatcgtaacattgtcataactcgttttaaaaaacgagaagttgaaatt
atggtggctacggatgtggccgcccgtggtctcgatattccgcacattagaaatgtagta
aactatgacattgctagggatattgacactcacactcatcgggttggtaggacaggccgt
gccggcgagaaaggtaccgcctacactctggttgtggacaaagataaggaattcgctgga
catttggtacgtaacctggagggtgccaatcaggaagttcccgaggaactgatgaaattg
gcaatgcagagcgcgtggttcagaaattcacgtttcaagaataacaataagggtaaaaat
ctgaacgttggcggtgcgggactaggcttccgcagtcgaccagttcccagtggaccgttg
aaggctttagaaggaccgtcatcttctgcggatggaggcagtggcagtggctggaaggga
cctgttacagatcgcctaacggctatgcgcgatacattcaaggcccaatataatgcacaa
ttcaaggcttcctccgataggacgtgggagaatactcttccggagggtggtgtcttcgcg
aaacccactatgtcgggttttgtacctgcgtccaatagagatgcacaggaagaactccaa
aaagatgacgagcaacatttttcgcaaaccggggatgaagatagacctcgaaagaagaag
agtagatggaactaa
DBGET
integrated database retrieval system
