Armigeres subalbatus: 134225941
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Entry
134225941 CDS
T09975
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD-like isoform X1
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
asua
Armigeres subalbatus
Pathway
asua03022
Basal transcription factors
asua03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
asua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134225941
09124 Replication and repair
03420 Nucleotide excision repair
134225941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asua03021
]
134225941
03036 Chromosome and associated proteins [BR:
asua03036
]
134225941
03400 DNA repair and recombination proteins [BR:
asua03400
]
134225941
Enzymes [BR:
asua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
134225941
Transcription machinery [BR:
asua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
134225941
Chromosome and associated proteins [BR:
asua03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
134225941
DNA repair and recombination proteins [BR:
asua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
134225941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
nSTAND3
SNF2-rel_dom
AAA_11
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
134225941
NCBI-ProteinID:
XP_062562377
LinkDB
All DBs
Position
3:95285314..95288680
Genome browser
AA seq
760 aa
AA seq
DB search
MRISVDGLLVYFPYEYIYPEQYAYMLELKRTFDAKGHCLLEMPSGTGKTTTLLSLIVAYI
MENPHIVRKLIYCSRTVPEIEKVIAELKHLMNYYEKQTGVMPNITGLVLSSRKNMCIHGE
VSKERDGKIVDAKCYGMTASYVRERAAADESVAVCQYYEGFQAEGKESALPPGVYSIDDL
KDFGRERNWCPYFLSRFAINQAHVVVYSYHYLLDPKIAEVVSKELAKESVVVCDEAHNID
NVCVDSMSVKINRRLIEKSTTGVHTLEKYVSEMKEDDRRRLNDEYLRLVQGLKDASFARE
TDMVLANPVLPSEILKEVVPGNIRNADHFLSFLKRFIEYIKSRLRVQHVVQESPAGFLKD
VQQKVCIERKPLRFCAERLSSLLRTLEITDLTEFGPLTVITSFATLVSTYTKGFTIIIEP
FDDKTPTVSNPIMHLSCMDSSIAMKPIFQRFQSVVITSGTLSPMDMYPKILDFEPVVMSS
FTMTLARPCLLPMIVSRGNDQVAISSKFETREDTAVTRNYGQLLVETAKTVPDGIVCFFT
SYLYLESVVASWYDQGIIDTLLRYKLLFIETQDNAETSYALMNYVKACECGRGAVLLAVA
RGRVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDFLTFDALRHA
AQCVGRAIRGKTDYGIMIFADKRFGRQDKRGKLPKWIQEHLTDNLTNLSTEEAMQLAKRW
LRQMAQPFTREDQLGVSLLTLEQLQSIEKEKLEKQAQGKK
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaggataagcgttgacggtttgctagtgtacttcccgtacgagtacatctatccggaa
cagtacgcctacatgttggaactaaaacgaaccttcgacgcgaagggtcactgcctgctg
gagatgccctcgggaacgggcaaaaccaccacattactatccctgatcgtggcgtacatc
atggaaaatccacatatcgtccggaagctgatttactgttcccgtacggtgccggagatc
gagaaggtcattgccgagttgaaacatctgatgaactattacgagaagcagaccggcgtg
atgccgaacatcaccgggctggtgttgagctcgcggaagaatatgtgcatccacggggag
gtcagcaaggaacgggacgggaaaattgttgatgccaagtgctacggaatgacggcaagc
tacgtgcgggagcgggcggccgctgatgaatcggttgcggtttgccagtactacgaggga
ttccaggcggagggcaaagagagcgcactgccgccgggggtttattcgattgatgatctg
aaggatttcggtcgcgagcgcaattggtgtccgtactttttgtccagatttgcgatcaat
caagcacacgtggtcgtatacagttatcattatttgttggatccaaaaattgccgaagtt
gtgtcgaaggagctggccaaggaatctgtcgttgtttgtgacgaggctcacaatattgac
aacgtatgtgtagattcaatgagtgttaaaataaatcgtcggttaattgaaaagagcaca
accggagtgcatacgctggagaaatacgtatcagaaatgaaagaagatgatcgtagacga
ttgaacgatgagtaccttcgtctggtacaaggattgaaagatgcatcatttgcacgggaa
acggatatggttcttgctaatccggtgctcccatccgagatcctcaaggaagttgttccc
ggtaatatacgtaacgcggatcactttttaagttttctgaagcgtttcatcgaatatatt
aaatctcggctgcgagtgcagcatgtggtacaggaaagtccggcaggatttcttaaagac
gtacagcagaaagtctgtatcgaacgcaaaccactgcgtttctgtgctgaacggctatcc
tcactgcttcggacgctggaaattacagatcttaccgaatttggtcccttgacggtgatc
acttcgtttgcgacgctagtttcaacctatacgaaaggtttcacgatcatcattgaaccg
ttcgatgataaaaccccaacggtttccaatccgattatgcacctgagctgtatggattcc
tcgatagcgatgaagccgattttccagcgcttccaaagtgtggtgattacgtcgggaaca
ttgtcgccaatggacatgtatccgaaaattttagatttcgaaccagtggtgatgagttcc
tttacgatgaccctggccagaccttgtctgctaccaatgattgtctcaagaggaaacgat
caagtggccatctcttccaagtttgagacccgtgaagatactgccgtaacgcggaattac
ggtcagttgctggtggaaacggctaaaactgtccccgatggaatcgtgtgcttcttcacg
tcctacttgtatctggaatcggtggtggcctcctggtacgatcagggcatcatcgatacg
cttctccgatacaagctgctgtttattgagactcaggacaatgccgaaacttcgtatgca
ttgatgaactacgtcaaggcgtgcgagtgcggacggggtgcagtgttgctggccgtcgcc
cgagggcgcgtttcggagggtgtcgatttcgatcaccacctgggacgggcggtgctgatg
ttcggcattccctatgtgtacacgcaatccagaatcctgaaggcacgcttggactaccta
cgggatcagttccagatccgggagaacgacttcctcacgtttgatgctttgcgacatgcc
gcgcagtgcgtgggtcgtgcaattcgaggtaaaactgattacggcataatgatctttgcc
gataagcgcttcggtcgacaggataagcgaggcaaactgcccaaatggattcaggaacac
ctaaccgataatctgaccaatcttagcacagaagaggcgatgcagctcgccaaacgatgg
ctccgtcagatggcacagccgtttactcgcgaggaccaactgggtgtttcgctgctaacg
ctcgaacagctgcaaagtatagagaaggaaaagttggagaagcaagcccaaggcaaaaaa
taa
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