Atlantibacter subterraneus: NLZ15_00800
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Entry
NLZ15_00800 CDS
T08300
Symbol
hmsP
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
asub
Atlantibacter subterraneus
Brite
KEGG Orthology (KO) [BR:
asub00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
NLZ15_00800 (hmsP)
Enzymes [BR:
asub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
NLZ15_00800 (hmsP)
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
T4_deiodinase
CHASE8
PspB
SafA
Motif
Other DBs
NCBI-ProteinID:
UTJ47639
LinkDB
All DBs
Position
170147..172141
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AA seq
664 aa
AA seq
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MRVSRSLTIKQMAMVSAVAVVFIFVFVVILLFHFVQQNRYNTAMQMESIARSVRLPLSAA
VLKADIPEAEAILKQIKPAGVISRADVVLPNQFQALRLSFTPERPIPVMIARIFEIPVQI
SLPLYSLERPANPQPLAYLVLQADSWRMYKFIISAISTLVTSWLLLSLMLSVAITWCINR
LMVRPLRKLARELNHLDAQDVLGHQLTLPRLHHDDEIAMLVRSYNRNQQTLLRQHEEMTS
QATRFPATELPNKPLLMALLDQSTGNSHPLALLVIACETLQDVAGVLNEEQREVLLLTLV
SKLKAALPPRMVLAQVSHYDFAVIAHGVKEPWHAITLAQRLQKELGEKLPINGIQLRPTA
SIGIAMFYGGLTPEQLYRRAISAAFSARRKGKNQIQFFDPVQMALAQKRLTEESDIITAL
DSDQFAIWLQPQVDLRSGELVSAEVLLRQKQPDGHWELPDDLIERIESCGLMVTVGHWIL
EESCRLLAAWQSRNIALPLSVNLSALQLLHHNMMNDVLELLSRYHIKPGTLILEVTESRR
IDDPDAAVNILRPLRQAGVRIALDDFGMGYASLRHLHHMKSVPVDVLKIDKNFVEGIPDD
HSMVSAIIAMAKSMELDVIAEGVENDAQRQWLADAGVVVAQGYLFGKAVTPAEFEKNWLP
NPKV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
ttgcgagtcagtcgttcgttaacgataaagcagatggcgatggtttcagccgtcgctgtg
gtttttatttttgtttttgtagtgattttgcttttccattttgtgcagcaaaatcgttat
aacactgcgatgcagatggaaagcatcgcccgttctgtgcgcctgccgctttctgccgcc
gtgctgaaagccgatatcccggaagccgaagccatccttaagcagatcaagcctgctggg
gttatcagccgcgcggatgtggtgctgcccaatcagtttcaggcattgcggttgagtttc
acccctgaaagaccgattccggtcatgattgcgcgtattttcgaaattccggtgcaaatt
tcgttgccgctttattcactggagcggcccgccaatccgcagccgctggcctatctggtg
ctgcaggccgattcctggcggatgtacaaattcatcatcagcgccatttcgacgctggtg
acgtcgtggctgctgctgtcgctgatgctctccgtggcgatcacctggtgcatcaaccgg
ctgatggtgcgtccgctacgcaagctggcgcgcgagctgaaccatctggatgcccaggac
gtgctggggcatcaactgacccttccgcgcctgcatcatgacgatgagatcgccatgctg
gtgcgcagctataaccgcaatcagcaaacgctgctgcgccagcatgaagagatgacttct
caggccacgcgcttcccggccaccgaattgcctaataaaccgctgctgatggccttgctg
gatcaatccaccggcaacagtcacccgctggcgttgctggtgattgcctgcgaaacgttg
caggacgtcgcaggcgtattaaatgaagaacaacgcgaagtcctgctgctgacgctggtg
agcaaacttaaagcggcgctgccgccgcgcatggtactggcgcaggtaagccattacgat
ttcgccgttatcgcccacggcgtgaaagagccctggcacgccattaccctggcgcagcgc
ctgcaaaaagagctgggcgaaaagctgccgattaacgggatccaactgcgccccaccgcc
agcatcggtatcgccatgttttacggtggcctgacgccggagcagttatatcgccgcgcg
atatccgccgccttcagcgcccgccgcaagggcaaaaaccagatccagttcttcgatccg
gtgcagatggcgctggcacaaaagcgtctgaccgaagagagcgacattattactgcgctg
gacagcgatcaatttgccatctggctacagccgcaggtggatttacgcagcggcgaactg
gtcagcgcggaagtgttgctgcgccagaagcagccggatggtcactgggagttgccggac
gatttaatcgaacgcattgagtcctgcgggctgatggtcacggtggggcactggatcctg
gaagaatcctgccggctgctggcggcctggcagtcgcgcaatatcgcgttgccgctgtcg
gtgaacctctcggcgctccagttattgcatcacaatatgatgaacgacgtgctggagctg
ctgtcgcgctatcacatcaaacccggcacgctgattctggaagtgaccgaaagccgtcgc
attgacgatccggatgcggcggtcaatattctccgtccgctgcgccaggccggcgtgcgc
attgcgctggatgattttggcatgggttacgccagcctgcgccacttgcatcatatgaag
tcggtaccggtagacgtgttaaaaatcgacaaaaacttcgtggaaggcatcccggacgac
cacagcatggtctcggcgattatcgcgatggcgaaaagcatggaactggacgtgattgcc
gaaggggtggaaaacgatgcccagcgtcagtggctggccgacgcgggtgtggttgttgcc
caggggtatctgtttggcaaagcggtgacgccagccgagtttgaaaaaaactggttacct
aacccgaaagtatga
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