Atlantibacter subterraneus: NLZ15_01265
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Entry
NLZ15_01265 CDS
T08300
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
asub
Atlantibacter subterraneus
Brite
KEGG Orthology (KO) [BR:
asub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asub03021
]
NLZ15_01265 (rpoH)
Transcription machinery [BR:
asub03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NLZ15_01265 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_AsnC-type
HTH_10
SANT_DAMP1_like
UCR_14kD
HTH_3
HTH_25
Rv2175c_wHTH
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
UTJ47727
LinkDB
All DBs
Position
269393..270250
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AA seq
285 aa
AA seq
DB search
MTKEMQTLALAPVGNLESYIRAANAWPMLSAEEERTLAEKLHYQGDLEAAKKLILSHLRF
VVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVTSKDVREMESRMAAQDM
TFDMSPDDDAPDGQPMAPVLYLQDKSSNFADGIEDDNWEEHAADKLSDAMQGLDERSQHI
IRARWLDEDSKTTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaactttagcgctcgctccggtaggcaacctggaatcctatatc
cgggccgccaacgcctggccgatgttatcggccgaggaagaacggacacttgctgaaaag
ctgcattaccagggcgatctggaagcagcgaaaaagctgatcctgtctcacctgcgattt
gttgttcatatcgctcgtaactacgcgggctatggcctgccgcaggcggatctgattcag
gaaggcaatatcggcctgatgaaagccgtgcgtcgcttcaacccggaagtgggcgtgcgt
ctggtgtccttcgcggtgcactggatcaaagcggaaattcacgaatacgtgctgcgtaac
tggcgtattgtgaaagtggcaaccaccaaagcacagcgcaagctgttctttaacctgcgc
aaaaccaagcagcgtctgggctggtttaaccaggatgaagtggaaatggtggctcgcgag
ctgggcgtgaccagcaaagacgtgcgtgaaatggagtcgcgtatggcggcccaggacatg
acgtttgatatgtcgccggacgacgatgcgccggacggacagccgatggccccggttctc
tacctacaggataaatcctcgaactttgctgacggcattgaggatgacaactgggaagag
cacgcggcggataaactgtctgatgcgatgcaggggctggacgaacgtagccagcacatc
atccgcgcccgctggctggatgaagacagcaaaaccacattgcaggaactggccgaccgt
tatggcgtctccgccgaacgtgtgcgccagcttgagaagaatgcaatgaaaaaactgcgc
gccgctatcgaagcctga
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