Atlantibacter subterraneus: NLZ15_02770
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Entry
NLZ15_02770 CDS
T08300
Symbol
lsrB
Name
(GenBank) autoinducer 2 ABC transporter substrate-binding protein LsrB
KO
K10555
AI-2 transport system substrate-binding protein
Organism
asub
Atlantibacter subterraneus
Pathway
asub02010
ABC transporters
asub02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
asub00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NLZ15_02770 (lsrB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NLZ15_02770 (lsrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
asub02000
]
NLZ15_02770 (lsrB)
Transporters [BR:
asub02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
NLZ15_02770 (lsrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
UTJ48007
LinkDB
All DBs
Position
complement(568447..569463)
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AA seq
338 aa
AA seq
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MNTAKRVLQCSALALALSVVTAQAADRIAFIPKLVGVGFFTSGGNGAKEAGKALGVDVTY
DGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVKVLTWDSDTKPE
CRSIYINQGTPEQLGGMLVEMASKQVTKPKAKVAFFYSSPTVTDQNQWVKEAKAKIAKDH
PEWEVVTTQFGYNDATKSLQTAEGILKAYPDLDAIIAPDANALPAAAQAAENLKRTGVAI
VGFSTPNVMRPYVERGTVKAFGLWDVVQQGKIAVNVADTLLKKGDLNVGDSVDVKDIGTL
KVEPNKVQGYDYEAKGNGIVLLPERVVFTKDNINNYDF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagcaaaacgtgtgctgcaatgtagtgctctggcactggccttgagcgtcgtg
actgcccaggcggcggatcgcatcgcctttattcccaagctggtcggcgtcgggttcttt
accagcggcggcaacggggcgaaagaagcgggcaaagcgctgggcgtggacgtcacctat
gacgggccgacggagccgagcgtgtcgggccaggtgcagttgatcaacaacttcgtgaac
cagggatacaacgcgattatcgtgtcggcggtctccccggacggcctgtgccctgccctg
aaacgcgccatgcagcgcggcgtaaaagtgctgacctgggactcggacaccaagccggaa
tgccgcagcatctacatcaaccagggcacgccggagcagttaggcgggatgctggtggag
atggcctcaaagcaggtgaccaaaccgaaagcgaaagtcgcgtttttctactccagccct
accgtgaccgatcaaaaccagtgggtaaaagaagccaaagcgaagatcgccaaagatcat
ccggagtgggaagtggttaccacccagtttggctataacgacgccaccaagtctctgcaa
accgccgaggggatcttaaaggcttacccggatctggacgcgatcatcgcgccggacgct
aacgcgctaccggcagccgcccaggcggcagaaaaccttaagcgcaccggcgtggcgatt
gtcgggttcagtactccgaacgtgatgcgcccctacgtggagcgcggcacggtgaaagcc
tttggcctgtgggacgtggtgcaacagggcaaaatcgcggtcaacgtggcggataccctg
ctgaagaaaggcgatcttaacgttggcgacagcgttgacgtgaaagacatcggcaccctg
aaagtggagccgaacaaagtgcagggttacgactacgaagccaaaggcaacggcatcgtg
ctgctgccggagcgcgtggtgttcaccaaagacaacatcaacaattacgatttctga
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