Atlantibacter subterraneus: NLZ15_04060
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Entry
NLZ15_04060 CDS
T08300
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
asub
Atlantibacter subterraneus
Pathway
asub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NLZ15_04060 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asub03400
]
NLZ15_04060 (recC)
Enzymes [BR:
asub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NLZ15_04060 (recC)
DNA repair and recombination proteins [BR:
asub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NLZ15_04060 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UTJ48250
LinkDB
All DBs
Position
859751..863125
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AA seq
1124 aa
AA seq
DB search
MLRVYHSNRLDVLEELMEYLIEQQPQPDPFDPEVVLVQSTGMAQWLQMSLAQKFGIAANI
EFPLPASFIWDMFVRVLKDIPQESAFSKQSMSWKLMTLLPQMLERPEFAMLRHYLEDDTD
KRKGFQLAARIADLYDQYLVYRPTWLARWEVDERVEGIGESQQWQAPLWKALVELTHQLN
QPQWHRANLYQRFISTLETATERPAGLPERVFICGISALPPVYLEALQALGKHIDIHLLF
TNPCRYYWGDIKDASYLARLLSRQRQKTRSDENTSLFQDSALASSLFNDNGEQATANPLL
ASWGKLGRDYLYLLSGLERFQELDAFVDITPDNLLHRIQNDLLELENHAVVGVTLETYEN
SESKRLLDPDDQSLTIHVCHSPQREVEILHDRLLKMLEEDPELTPRDIIVMVADIDSYSP
FIQAVFGAARDNRRIPYAISDRRARQAHPALQAFISLLSLPDSRFTAEDVLALLEVPALA
ARFAIDEQGLRYLRQWVTEAGIRWGMDDDNVREFDLPATGQHTWHFGLTRMLLGYAMESR
VGEWQSILPYDESSGLIAELAGNLADLLMQLNIWRAGLSQNRPLVEWLPVCRDLLQSLFD
PDSETEAALTLIEQQWQAMIEQGVASHYGEEVPLSLLRDEISSRLDQERISQRFLAGPVN
FCTLMPMRSIPFKVVCLLGMNDGVYPRTLSPLGFDLMSDKPLKGDRSRRDDDRYLFLEAL
ISAQHQLYISYIGRSVQDNAERYPSVLVEELVDYVAQSHYLPGDASLNCDDSARRVKQHI
TRLHPRTPFEPENFRVGDERQSYAREWLPAACGEGQAQPSFIHPLTPFETTEITLEQLAR
FWRHPVRAFFQMRLRVNFHAEEVELMDTEPFTLDSLDKFYLNQDLLTTLVEQQDPEPLFR
RYKAAGSLPYGPFGELFWEEQLAEMQTMADEIIALRCESENMEIDLHIDGHRVTGWLPQV
QADGLLRWRPSVLRVEHGMQLWLEHLVYCACGRDGSSRLYGRKSTRWHFPPMDAEQAKGY
LLMLIEGYKAGLTEPLIVLPQSGGEWLKACYDKETDAILWDDETQQKARNKLIQAWTGNY
NIEGEGADMWYQRLWRTLEPDYYDAIIEQAQRYLLPLFRFNQTE
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgggtttaccactcgaatcgtctggatgtgcttgaggagctcatggagtatctc
attgagcaacagcctcagcccgatcctttcgatccggaagtggtgctggtgcaaagcacc
gggatggcacagtggctgcaaatgtccctggcgcaaaaatttggtatcgcggcgaacatt
gaattcccgctacccgccagctttatctgggatatgttcgtacgtgtgttgaaagacatt
cctcaggagagcgcgttcagcaagcagagcatgagctggaaactgatgacgctactgccg
caaatgctcgagcgccccgaatttgccatgcttcgtcattatcttgaagatgatacggac
aaacggaagggctttcagctcgcagcgcgcattgcggatttgtacgaccagtatctggtt
taccgcccaacatggcttgcccgttgggaagtggatgagcgtgtagaggggattggcgaa
tcacagcaatggcaggcgccgctctggaaagcgctggtggaattaacccaccagttgaat
cagccgcagtggcatcgtgccaatctttatcagcgctttatttccacccttgagacggca
acggagcgccctgcgggtttaccggaacgggtgtttatctgcggcatttccgctctgccg
ccggtctaccttgaagccttacaggcactgggcaagcatattgatatccatctgctgttt
accaatccctgccgttactactggggtgacattaaagatgccagttacctggcgaggctg
ctgagtcgtcagcgtcagaaaacgcgcagcgatgaaaacacgtcgctgtttcaggacagc
gcgctggcatcttctcttttcaacgataacggcgagcaggcgaccgccaatccgctgctg
gcctcatggggaaaactgggccgcgattatctgtacttgctttccgggttggaacgtttc
caggaactggatgcctttgtggatataacaccggataacctgctgcatcgtatccagaac
gatttactggagctggaaaaccatgcggtggtaggcgtcacgcttgagacctatgagaac
agtgaaagcaaaagactattagatcctgacgatcaaagcctgacgatccacgtctgccac
agcccccagcgcgaagtagaaatcctgcacgatcgtttgctgaaaatgttggaagaggac
cccgaactcacgccgcgggatatcatcgtcatggtggcggatatcgacagctacagcccg
tttattcaggcggtatttggcgcggcgcgcgataaccgccggatcccatacgcgatttcc
gaccgccgggcgcgccaggcgcatccggcactccaggcctttatttccctgctttccttg
ccggatagccgttttacggcggaagacgtcctggcgctgctggaagtcccggcactggcg
gcgcgtttcgccatcgacgaacaggggttgcgctatctacgccagtgggtcaccgaagcc
gggatacgctgggggatggatgacgacaacgtccgcgagttcgacctgccagcaaccggc
caacatacctggcatttcggcctgacccgtatgctgttgggttatgccatggagagccgc
gttggggagtggcagtcgatcctgccgtatgacgagtcgagcggtttgattgccgaactg
gcaggcaacctggcggacctgctgatgcagctgaacatctggcgcgcgggcctcagccag
aacagaccgctggtggaatggctgccggtgtgccgcgacctgctgcaaagcctttttgac
ccggatagcgaaaccgaagcggcgttaacgctgatcgaacagcagtggcaagccatgatc
gagcagggagtcgcctcccactacggtgaagaggtgccgctgagcctgctgcgtgatgag
atttcgtcgcgtctcgatcaggagcgcatcagccagcgtttcttagccggaccggtgaat
ttctgtacgctgatgccgatgcgttccatcccgttcaaagtggtctgcctgttgggtatg
aacgacggagtttacccgcgcacgctgtcgccgctggggttcgacctgatgagcgataaa
ccgctcaagggcgatcgaagccgtcgcgacgacgatcggtatctgttccttgaagcgctg
atttccgcacagcatcagctctacatcagctacattggccgttcggtgcaggacaatgcg
gagcggtatccttcggtacttgtagaggaactggtggattacgtggcgcaaagccattac
ctgccgggtgatgcgtcgctcaactgcgatgacagcgcccgccgcgttaagcaacacatt
acgcgcctgcacccgcgtacacccttcgagccggaaaatttccgcgtgggagatgagcgg
cagagctatgcccgcgaatggctgcccgccgcctgcggagaagggcaggcgcagccctcg
tttatccacccgctaacgccgtttgaaaccacggaaatcaccctggaacaactggcgcgt
ttctggcggcacccggtgcgggccttcttccagatgaggctgcgggttaatttccacgcc
gaagaagtggagttaatggacaccgagccgtttaccctcgatagtctggataaattttat
ctgaatcaggatctgctcacgacgctggtggaacagcaggatccggaaccgcttttccgc
cgctataaggctgccggttcgctgccttacgggccgttcggcgaactgttctgggaggag
caactggcggaaatgcagaccatggccgatgagatcatcgccctgcgctgcgaaagcgaa
aacatggaaatcgacctgcatattgacgggcatcgcgttaccggctggctaccgcaggtt
caggcggacggtctgctgcgctggcggccatcggttttgcgggttgagcatggcatgcaa
ctttggctggagcatcttgtctactgtgcctgtggtcgtgacggcagtagccggttgtat
gggcgaaaatccacgcgctggcatttcccgcctatggatgcggagcaggcgaaagggtat
ttgctgatgttaatcgaaggctataaggcgggcttaaccgagcccttgatcgtcttgccg
cagtccggcggcgagtggttaaaagcctgctatgacaaagaaactgacgccattttgtgg
gatgacgaaacccagcaaaaagcgcgcaataagctgattcaggcatggaccggtaattac
aatattgaaggtgaaggggcggacatgtggtatcaacgcctgtggcgcacgctcgagcct
gattattacgacgctattatcgagcaggcgcagcgttacttattgcccttatttcggttc
aatcaaacagaatga
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