Atlantibacter subterraneus: NLZ15_04070
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Entry
NLZ15_04070 CDS
T08300
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
asub
Atlantibacter subterraneus
Pathway
asub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NLZ15_04070 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asub03400
]
NLZ15_04070 (recB)
Enzymes [BR:
asub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NLZ15_04070 (recB)
DNA repair and recombination proteins [BR:
asub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NLZ15_04070 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UTJ48252
LinkDB
All DBs
Position
866160..869702
Genome browser
AA seq
1180 aa
AA seq
DB search
MTDETVQPLDPLRLPLVGERLIEASAGTGKTYTIAALYLRLLLGLGGDAAHPRILMPESL
LVVTFTEAATEELRGRIRTNIHELRIACLRGHTDNPLFQRLLAEIPDLNDAAQALLLAER
QMDEASIFTIHGFCQRMLNLNAFESGMPFEQKLIEDESLLRYQACADFWRRHCYPLDKSV
ARPVSELWQGPHALLQEINSYLQGEAPQLKAPPSEDETIESRHKKIVERLERVKTLWREA
ADDIGPLIAGSGVDKRSYSSRNLPNWLDKVNAWAGEETQTYALPDALEKFAQSTLDEKTK
KGEPPRHALFVEIDALLAEPLSLRDLVLARAIKEIRYTVAMQKRRRGELGFDDMLSRLDE
ALHQPGGEALAEAIRARYPAAMIDEFQDTDPQQYRIFRRIWHKQPDTALLLIGDPKQAIY
AFRGADIFTYMRARGEVSAHYTLDTNWRSAPGMVASVNQLFSQLPQPFMFKEIPFLKVNA
AEKNHGLRFEINGQPQSAMRLWLMDGEGAGVSEYQQTMATLCAGQIRDWLDAGARGKALL
CGSDKQRPVQASDITVLVRNRIEAAVIRQALEALNIPSVYLSNRDSVFSTQEALDLLWVL
QAILNPELESALRSAIATSMLGLNAAAIDAINQDEDAWDTLVEEFDGYRQIWLARGVMPT
VRALMVERRIAENLLATPGGERRLTDLLHLTELLQEASAQLDSEPALLRWLSQHIAEPDA
NASSQQLRLESDKHLVQIVTVHKSKGLEYPLVWLPFIADYREQKQAFYHDRATFAPVLDL
DNGEESLELAEAERLAEDLRLLYVALTRSVWHCSIGIAPLFKGRGGKKGDTSLHQSALGR
LIQGGEPQDAAGLRRCLEALCGEDITLEIAADPDTQPWQPPQPPALQLDAREPQREVKDS
WRVTSYSALQQHGGSAAQLLLPRLDIDAAGNRVETVSPDMTPHTFPRGASPGTFLHGLFE
NLDFTAQLDPGWLAEQLQLGGFDGDWAGVFSGWFEAILAAPLTDSGASLNQLGAKDKQVE
LEFYLPIDTDLDPRRLDAIIRRYDPLSAPCPPLDFRQVRGMLKGFIDLVFRWQGRYYLLD
YKSNWLGEGSEAYTREAMAQAMQSHRYDLQYQLYTLALHRYLRHRLPGYNYEQHFGGVIY
LFLRGVDPSQPSNGIFTTRPDARLVDEMDALFAGQELATQ
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgagaccgtgcagccccttgatccactacgtttaccgctggttggtgaacgg
ctgatcgaagcgtctgccggtacagggaaaacctatactattgccgcgctctatttgcgg
ctgttgctggggctgggcggtgacgccgcccatccgcgcatcctgatgccggaatccctg
ctggtagtgacctttaccgaagcggccacggaagagctccgtggccgtatccgcaccaac
atccatgagctgcgtatcgcctgtctgcgcgggcatactgacaatccgctgtttcagcga
ctgttagcggaaattcccgatctgaacgatgcggctcaggcgctgctactggcggagcgc
cagatggatgaggcctcgatcttcaccattcacggcttctgccagcggatgctcaatctc
aacgcgtttgaatccgggatgccgtttgagcaaaagctgattgaggatgagtccctgctg
cgctatcaggcgtgcgcggatttctggcgtcgccactgctatccgttagacaaatccgtg
gcgcgcccggtgagcgagttatggcaggggccgcacgccttgctgcaggagatcaacagc
tatctgcagggtgaagcgccgcagttgaaagcgccgccctcagaagacgagactattgaa
agccgccataaaaaaatcgtcgagcggcttgagcgggttaaaaccctgtggcgcgaggcg
gcagatgatattggcccgctgattgccggttctggtgtggataagcgcagttacagcagc
cgcaacctgcctaactggctggataaagtcaacgcatgggccggtgaagagacccaaacc
tatgcattgccggacgcgctggaaaaattcgcccagtcgactctggatgagaaaaccaaa
aaaggcgagccgccgcgccatgcgctatttgtcgagatcgatgcgctgctggcagagccg
ctgtcgctgcgcgatctggtgctcgcccgcgccatcaaagagatccgctataccgtggcg
atgcaaaaacgccgtcgcggcgagctgggctttgacgacatgttaagccgccttgatgag
gcgctgcaccagccgggcggcgaggcgctggccgaggcgatacgcgctcgctatccggcg
gcgatgattgatgaattccaggataccgacccgcagcaataccggattttccgccgcatc
tggcataagcagccggacacggcgttgctgttgattggtgaccccaagcaggcgatttac
gccttccgtggcgcggatatctttacctatatgcgcgcccgtggagaagttagcgctcac
tatacgcttgatacaaactggcgttctgcgccaggtatggtggcaagtgtgaatcagctg
tttagccagctcccgcagccgtttatgttcaaagaaattcctttcctgaaggttaacgcc
gccgaaaagaatcacggcttgcgctttgaaatcaacggacagccgcaatcggccatgcgc
ctgtggctaatggatggcgaaggcgctggcgttagcgagtaccaacaaaccatggcgacc
ctctgtgccgggcaaattcgcgactggctggatgcgggcgcgcggggcaaggcgctgctg
tgcggtagcgataaacaacggccggttcaggcgtccgatatcactgtgctggtgcgtaac
cgcattgaagccgccgtgatccgccaggcgctggaagcgctgaacattccgtcggtatat
ctctccaaccgcgacagcgtattttcgactcaggaagcgctcgacctgctgtgggtattg
caggcgatcctgaatcctgaactggaaagcgcattgcgcagcgctatcgccaccagcatg
ctcggcctgaacgccgctgccatcgacgccatcaatcaggatgaggacgcctgggatacg
ctggtggaagagtttgacggctatcggcaaatctggctggcgcgcggcgtaatgcccacg
gtccgcgcactgatggtggaacggcggattgccgaaaacctgctggcgacgcccggcggt
gagcggcgcttaaccgatctgctgcatttgacggagctgttgcaggaagcctctgcgcaa
ctcgacagcgaaccggcgctgctgcgctggctgtcacagcatatcgccgagccggatgcc
aatgcctcaagccagcagctccggctggaaagcgacaagcatttagtgcagatcgtgacg
gtgcataagtcgaaagggctggagtacccgctggtctggctgccgtttatcgccgattac
cgcgagcagaaacaggcgttttatcacgatcgcgccacgttcgcgccggtgctggatttg
gataacggtgaggagagcctggagctggctgaagccgagcgtttggcggaggatttacgc
ttgctgtacgtggcgctgacccgctccgtctggcattgcagcatcggcattgcgccgcta
tttaaaggccggggcgggaaaaaaggcgataccagcctgcaccaaagcgcgctgggccgg
ttgattcagggcggtgagccgcaggacgccgccgggctacgtcgctgtctggaagcgtta
tgcggcgaggatatcacgctggaaattgccgccgaccctgatacccaaccctggcagccc
ccgcaaccgcccgccttgcagctggacgcccgtgaaccgcagcgtgaagtgaaagacagc
tggcgagttaccagctactccgcgctccagcagcacggcggcagcgccgcgcagctgctg
ttgccgcgcctcgatattgatgccgcaggcaatcgcgttgaaaccgtcagccctgatatg
acgccgcacacttttccgcgcggcgcgtcgccgggcacctttttgcacggcttgtttgaa
aacctggattttaccgcacagctcgatcccggctggcttgcggaacagctgcaactgggc
ggattcgacggcgactgggccggtgtgttttccggctggttcgaggcgattttagccgcg
ccgcttaccgacagcggtgccagccttaatcaacttggcgcgaaggataagcaggttgag
ctggagttttatttacccatcgataccgatctcgatccccggcggctcgacgcgataatc
cgacgttacgatccgctctccgcgccgtgcccgccgctggatttccgtcaggtacgcggg
atgctaaaaggctttattgatttggtgttccgctggcaggggcgttattacctgctggac
tacaaatcgaactggctgggtgagggcagcgaagcctatacccgcgaggcgatggcgcag
gcgatgcagtcccaccgctacgatttgcagtatcagctgtataccctggcgctccaccgc
tacctgcgccaccggctgcccggttataactacgagcagcatttcggcggcgtgatttac
ctgttcctgcgcggtgtggacccgagccagccgtcaaacgggatttttaccacccggcca
gatgccaggttagttgatgaaatggatgcgctgtttgcaggtcaggagctggcgacgcaa
tga
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