Atlantibacter subterraneus: NLZ15_07910
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Entry
NLZ15_07910 CDS
T08300
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
asub
Atlantibacter subterraneus
Pathway
asub03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NLZ15_07910 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asub03400
]
NLZ15_07910 (sbcB)
Enzymes [BR:
asub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
NLZ15_07910 (sbcB)
DNA repair and recombination proteins [BR:
asub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NLZ15_07910 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NLZ15_07910 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NLZ15_07910 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UTJ48928
LinkDB
All DBs
Position
complement(1684046..1685470)
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AA seq
474 aa
AA seq
DB search
MTDSAAQPTFLFHDYETFGTRPALDRPAQFAAIRTDMDFNIIGEPEVFYCKPADDYLPQP
EAVLITGITPQIAAARGTHEADFAKRIHDLFTVPNTCVVGYNNVRFDDEVTRNVFYRNFY
DPYAWSWQNHNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTVANGIEHANAH
DAMADVYATIAMAKLVKTQQPRLFEYLFSHRNKQKLATLIDIPQMKPLVHVSGMFGAFRG
NTSWIAPLAWHPDNRNAVIMVDLAGDMSPLLELDADALRERLYTAKSELGDDAAVPIKLV
HLNKCPVLAQANTLRPEDADRLGIDRQRCLDNLKILRERPDVREKVVALYADAEPFVPSD
DVDAQLYNGFFSDADRAGMRIILQTDPQNLPALDISFVDKRIEKLLFNYRARNFPGTLDH
EEQQRWLRHRQARFTPEYLQSYAQELEMLYGQYEGDKEKIALLKALYQYVQDVL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgactgattccgcagcacagccgacttttcttttccacgattacgaaaccttcggcacc
cgcccggcgctggaccgccccgcgcagttcgccgcaatacgtaccgatatggatttcaat
atcatcggcgagcctgaggtgttttattgcaaaccggccgatgactatctgccgcagccg
gaagcggtgctgattaccggcatcacgcctcaaattgcagcggcgcgcggcacccatgaa
gccgatttcgccaaacgcatccatgatttattcaccgtgccgaacacctgcgtggtgggt
tacaacaacgtgcgcttcgatgatgaagtcacgcgtaacgtgttttaccgcaacttttac
gatccctatgcctggagctggcagaaccataattcgcgctgggatttgttggacgtgatg
cgcgcctgctatgccctgcgcccggaaggcatcaactggccggaaaacgacgacgggctg
ccgagctttcgcctggagcatcttaccgtcgccaacggcattgagcatgccaacgctcac
gacgcgatggcagatgtgtacgccactatcgcgatggcgaaactggtgaagacccagcaa
ccgcggctgtttgagtacctgttcagccaccgcaacaagcaaaagctggcgacgctgatt
gatatcccgcagatgaagcccctggtgcatgtttccggtatgttcggggcatttcgcggc
aataccagctggatcgcgccgctggcgtggcatccggacaaccgcaacgcggtgattatg
gtggatttggcgggcgatatgtcgccactgctggagctggatgccgatgcgctgcgtgaa
cggctgtataccgctaaaagcgagttaggtgatgacgcggcagtgccgattaagctggtt
catctgaataaatgcccggtgctggcgcaggccaatacgctgcgcccggaagatgccgac
aggctgggcattgaccgccagcgttgcctggataacctgaaaatcctgcgcgagcgcccg
gacgtgcgcgaaaaagtggtagccctgtacgctgacgccgagccattcgtaccgtcagac
gatgtggatgcccagctgtataacggcttcttcagcgatgccgatcgcgccgggatgcgt
attatcctgcaaaccgatccgcagaacctgccggcgctggatatcagctttgtggataag
cgcatcgagaaactgctgtttaactaccgggcgcgtaatttccccggcacgctggatcac
gaagagcagcagcgctggctgcgccatcgccaggcgcgctttacgccggaatatttgcaa
agctacgcccaggaactggagatgctgtacggacagtacgaaggggataaagagaaaatc
gctctgctgaaggcgctgtatcagtacgttcaggacgtactgtaa
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