Atlantibacter subterraneus: NLZ15_09765
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Entry
NLZ15_09765 CDS
T08300
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
asub
Atlantibacter subterraneus
Brite
KEGG Orthology (KO) [BR:
asub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asub03016
]
NLZ15_09765
Enzymes [BR:
asub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NLZ15_09765
Transfer RNA biogenesis [BR:
asub03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NLZ15_09765
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
OSR1_C
ODP
Motif
Other DBs
NCBI-ProteinID:
UTJ49265
LinkDB
All DBs
Position
complement(2070595..2072529)
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
SAVIHTEKEKESAEPETLIEPFLTRFVGRVQKKDDRLSIVPDHSLIKDVISCRAARNVEH
DFQNGDWAVAEMRRHPLKGDRGFYAELTQFITFGDDHFAPWWVTLARHNLEREAPNGVAT
EMLDEGLVREDLTALDFVTIDSASTEDMDDALFVEQREDGSLALTVAIADPTAWIAPNSK
LDGMAKVRAFTNYLPGFNIPMLPRELSDDLCSLRAHEARPALACRMVIQQDGAIADDIRF
FAATVESKAKLAYDNVSDWLENSGEWQPESEAIAQQIRLLQQVCERRNSWRHQHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANVCAARVLRDKLGFGIYNVHAGFD
PANTEQLATLLQSHGMHVDAQEVLTLEGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTE
PGAHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGETAERPQEDVLTPMAERRRANRM
AERDVGDWLYARFLKDKAGTDSRFAAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKSEVAYKVTDVIDVTIAEVRMETRSVIARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggataacccgctgctagcgcagcttaaacagcaactgcattcccaaacgcca
cgcgctgaaggcgtggtaaaagccaccgaaaaaggatttggttttctcgaagttgacgcg
caaaaaagctacttcatcccgccgccgcagatgaagaaagtgatgcacggcgaccggatc
agcgcggtgatccacactgaaaaagagaaagagagcgctgaaccagaaacgctgattgaa
cctttcctgacccgcttcgttggccgggtacaaaagaaagacgaccgtctttccattgtg
ccggatcattccctgattaaagacgtcatctcctgccgcgccgcccggaatgttgagcac
gatttccagaacggcgactgggcagtggccgaaatgcgccgccacccgttgaaaggcgat
cgcggtttctacgcggagcttactcagttcatcacctttggcgacgatcattttgccccg
tggtgggtaaccctggcgcgccataatcttgagcgcgaagcgccaaacggcgtggcgacg
gagatgctggatgaaggcctggtacgcgaagatctcaccgcactggattttgtcaccatc
gacagcgccagtaccgaagatatggacgatgcgctgtttgtcgaacagcgtgaagacggc
agcctggcgctgaccgtggcgattgccgaccctaccgcctggattgcgccgaacagtaag
ctcgacggcatggcgaaagtccgcgcgtttaccaactatctgccgggctttaatatcccg
atgctgccgcgcgagctgtcagacgatctgtgctcgctgcgcgcccacgaagcgcgtccg
gcgctggcctgccgcatggtgatccagcaagacggcgctatcgctgacgatatccgtttc
tttgccgcgaccgtagagtccaaagccaaactggcctatgacaatgtctccgactggctg
gaaaacagcggcgagtggcagccggaaagcgaagcgattgcccaacaaatccgcctgctg
caacaggtctgcgaacgccgtaatagctggcgtcaccagcatgcgctggtatttaaagac
cgtccggactaccgttttgtgctgggcgagaaaggcgaagtgctggatatcgtggcagag
ccgcgccgcatcgccaaccgcatcgtggaagaatcgatgatcgctgccaacgtctgcgcc
gcgcgcgtgttgcgcgataagctgggcttcggcatttacaacgttcacgctgggttcgat
ccggccaataccgaacaactggctaccctgctgcaatcccacggtatgcatgttgatgcc
caggaagtgctgacgctggaaggcttctgcaaacttcgccgtgagctggacgctcagcca
accggcttcctggacagccgcatccgccgcttccagtcctttgcggaaatcagcaccgag
ccgggcgcgcactttggtctggggcttgaggcctacgccacctggacgtcgccgatccgc
aagtatggcgatatgatcaaccatcgcctgctgaaagccattatcaaaggtgaaaccgca
gagcgtccgcaggaagacgtgctgacgccaatggcggagcgccgccgcgccaaccgtatg
gcggagcgcgacgtcggcgactggttatatgcgcgattcctgaaagataaagccggtacc
gatagccgtttcgcggcggaaattatcgatatcagccgcggcggcatgcgcgtgcgcctg
gtggataatggcgcagtggcgtttatccctgccccgttccttcatgctgtgcgcgatgag
ctggtatgcagccaggaaaacggcaccgtgcagatcaagagcgaagtggcctataaagtc
actgacgtgatcgatgtgaccatcgctgaagtgcgcatggaaacccgtagcgtgattgct
cgtccggcagcgtaa
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