Atlantibacter subterranea: NLZ15_16790
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Entry
NLZ15_16790 CDS
T08300
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
asub
Atlantibacter subterranea
Brite
KEGG Orthology (KO) [BR:
asub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asub03400
]
NLZ15_16790 (sbcD)
DNA repair and recombination proteins [BR:
asub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NLZ15_16790 (sbcD)
Archaeal homologous recombinant proteins
NLZ15_16790 (sbcD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
dDENN
Motif
Other DBs
NCBI-ProteinID:
UTJ49678
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Position
3574071..3575285
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AA seq
404 aa
AA seq
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MRILHTSDWHLGQNFYTKSRAAEHQAFLSWLRQTAAEQQVDAIIVAGDIFDTGSPPSYAR
ELYNRFVVDLQPTGCQLIVLAGNHDSVATLNESRELLACLNTRVIASAQHHPEGQALIIN
RLNGEPGAVLCPIPFLRPRDITRSRAGESGSEKQLQLLEAISRHYQECFDAACRLRGERA
LPIIATGHLTALGVTKTDAVRDIYIGTLDAFPASHFPAADYIALGHIHRAQCVAKSEHIR
YCGSPIPLSFDEAGGAKIVNLVEFSAGSLTAITPLEVPVTQPLAMIKGNLAQIEQQLEQW
RDAPAEPKTWLDIEIVSDDFLHDMQRQIVAMTENLPVEVILLRRNREQREQAIARLETET
LSELSVVDVFERRLQSEALEDDEAARLRTLFAQTLETMQQEENA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctccacacctcagactggcacctcggtcaaaatttttatactaaaagccgc
gccgcggagcatcaggcctttctgagctggctgcgccagacggcggcggaacagcaggtg
gacgccatcatcgtcgccggggatattttcgataccggctcgccgccgagctacgcgcgc
gaactgtataaccgctttgttgtggatctccagcccaccggctgccagctgatcgtgctg
gcaggcaatcatgattctgtcgccacgctcaatgaatcccgcgagctgctggcctgcctg
aatacccgggtgattgccagtgcgcagcatcatccggaaggccaggcgctgattatcaat
agacttaatggcgaaccgggcgcggtgctgtgtccgatcccatttttacgcccgcgcgac
atcacccgaagccgcgccggggagtcgggcagcgaaaaacagctgcaactgttagaggcg
atttcccgccactatcaggaatgctttgacgccgcctgtcggctgcgcggcgaacgggcg
ctgccgattatcgccaccgggcacttaacggcgctgggcgtcaccaaaaccgacgcggtg
cgtgatatctacatcggcacgctggatgccttccccgccagccatttcccggcggcggat
tacatcgcgctgggccatattcaccgcgcccagtgcgtagcgaaaagcgaacatatccgc
tattgcggctcgccgatcccgctcagttttgatgaagccggcggcgcaaagatagtgaat
ctggtggagttttccgccgggtcgctgaccgctatcaccccgctggaggtgcccgttacc
cagccgctggcgatgatcaaaggcaatctggcgcaaattgagcagcagcttgaacagtgg
cgcgacgcgcctgccgagccgaaaacctggctggatatcgaaatcgtcagcgacgacttc
ctgcacgatatgcagcgtcagattgttgccatgaccgaaaacctgccggtggaagtgatt
ctgctacgccgcaaccgcgagcagcgggaacaggccatcgcccgcctggaaaccgaaacc
ctgagcgaactgagcgtcgtggacgtgtttgaacgccgcctgcaaagcgaagcgctggaa
gacgatgaagccgcccggctgaggaccctgttcgcccaaaccctggagacgatgcagcag
gaggaaaacgcatga
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