Atlantibacter subterraneus: NLZ15_17900
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Entry
NLZ15_17900 CDS
T08300
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
asub
Atlantibacter subterraneus
Pathway
asub03030
DNA replication
asub03430
Mismatch repair
asub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NLZ15_17900 (dnaE)
03430 Mismatch repair
NLZ15_17900 (dnaE)
03440 Homologous recombination
NLZ15_17900 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asub03032
]
NLZ15_17900 (dnaE)
03400 DNA repair and recombination proteins [BR:
asub03400
]
NLZ15_17900 (dnaE)
Enzymes [BR:
asub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NLZ15_17900 (dnaE)
DNA replication proteins [BR:
asub03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NLZ15_17900 (dnaE)
DNA repair and recombination proteins [BR:
asub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NLZ15_17900 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
MutS_II
Motif
Other DBs
NCBI-ProteinID:
UTJ46685
LinkDB
All DBs
Position
complement(3766460..3769942)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGGAHGA
GMKPIIGADFNVHNPIMGDELNEITVLAANNDGYQNLTLLISRAYQRGYGAAGPFIDIEW
LAELNHGLILLSGARNGDVGKSLLRGNMALVDQCLSFYQQHFADRFYLELIRTGRTDEER
YLHAAVALAEEKGVPVVATNDVRFIDAGDFDAHEIRVAIHDGFTLDDPKRPRNYSTQQYM
RSEEEMCELFADIPEALENSVEIARRCNVTVRLGEYFLPQFPTGDMTTEDFLVAKSKEGL
EERLEFLFPDPEERAKRRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDRVIDHVAE
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEMGQHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRRAKQGLEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEEGAKNNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNKDGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHARAEAIGQADMFGVLAEEPEQIEKSYANCQPWPEQTVLDGERETLGLY
LTGHPINQYLKEIERYVGGMRLKDMHPTERGKVITAAGLVIASRVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALEKYQHLLEQDRILIVSGQVSFDDFSGGLKMTAREVMDIADAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacctcgttttgtgcacctgcgggtgcacagtgactactccatgatcgatggg
cttgccaagacgggaccgctggttaaaaaggcggcctcgctggggatgcctgcgctggcg
atcaccgacttcaccaacctgtgtggtctggttaagttttacgggggcgcacacggcgcg
ggcatgaagccgattatcggcgcggattttaacgttcataacccgattatgggcgatgag
ctgaacgaaattaccgtgctggccgccaacaacgacggctaccagaatcttacgctgctg
atttcccgtgcctaccagcgcgggtatggggccgcagggccgtttatcgatatcgaatgg
ctggcggagcttaatcacggcttgatcctgctctctggcgcgcgcaatggcgacgttggt
aaaagtttgctgcgcggcaatatggcgttggtggatcagtgcctgagcttctaccagcag
cattttgccgaccggttttatctggagctgatccgcaccgggcgcaccgatgaagagcgt
tatctgcacgccgccgtcgcgctggcggaagagaagggcgtgccggttgtcgccaccaac
gacgtgcgttttatcgatgccggcgattttgatgcccacgaaatccgcgtcgccattcac
gacggtttcaccctcgacgaccctaagcgcccgcgcaactactcgacgcagcaatacatg
cgcagcgaagaggagatgtgcgagctgttcgcggatattccggaagcgctggaaaacagc
gttgagattgcccgccgctgtaacgtgactgtgcgcctcggcgagtatttcctgccgcag
ttccccaccggcgatatgaccaccgaggatttcctggtggcgaagtcaaaagagggtctg
gaagagcgcctggagtttctgttcccggacccggaagaacgggctaagcgccgaccggaa
tacgatgagcgtctggatattgaactccaggtgatcaaccagatgggtttcccgggctac
ttcctgatcgtgatggagtttatccagtggtcgaaagataacggcgtgccggtaggccca
ggccgtggctccggcgcaggttcgctggtggcctatgccctgaaaattaccgacctcgat
ccgctggaattcgacctgctgttcgaacgtttcctcaacccggagcgtgtctcgatgccc
gacttcgacgtcgacttctgcatggagaagcgcgatcgggttatcgatcacgtggcggaa
atgtacgggcgcgaggcggtttcgcagatcattaccttcggaaccatggccgcaaaagcg
gtgatccgcgacgtgggccgtgtgctgggccacccgtacggcttcgttgaccgtatttcc
aagctggtgccgcccgatccgggcatgaccctggcgaaggcatttgaagccgaaccacag
ctgccagaaatctatgaagccgacgaagaggtccgggcgctgatcgacatggcgcgcaaa
ctggaaggggtgacccgtaacgccggtaagcacgcgggcggcgtggtaatcgcgccgacc
aaaattaccgacttcgccccgctgtactgcgatgaaatgggccagcacccggttacccag
tttgataaaaacgacgtggaatatgcgggcctggtgaagttcgacttcctggggctgcgc
acgctgaccatcatcgactgggcgttgaagatgatcaacccgcgccgggcgaagcagggt
ctggagcccatcgacatcgccgccatcccgctggatgacaaaaaaagcttcgacatgctg
caacgctcggaaaccactgcggtattccagcttgaatcgcgcggcatgaaggatctgatt
aaacgcctgcagccggactgcttcgaagacatgatcgcactggtggcgctgttccgcccg
gggccgctgcagtcgggcatggtagataactttatcgaccgtaaacatggccgtgaagcg
atctcctatccggatatccagtggcagcatgagagcctgaaaccggtactggagccgacc
tatggcatcatcctgtatcaggaacaggtgatgcagattgcccaggtgctctcgggctat
acccttggcggcgcggatatgctgcgtcgcgctatgggtaaaaagaagcctgaagagatg
gccaaacagcgttcggtgtttgaagagggcgcgaaaaataacggcgtcgatggcgaactg
gcgatgaaaatcttcgacctggtggagaaattcgcgggttacggatttaacaaatcgcac
tcggcggcctatgctctggtatcctaccaaacgctttggctgaaggcgcattacccggcg
gagtttatggcggcggtaatgacggcggatatggataacaccgacaaagtggtcgggctg
gtggatgagtgctggcgcatggggctaaaaatcctgccgccggacattaactccgggctg
tatcatttccacgtcaacgatgacggggagattgtttacggcatcggcgcgattaaaggc
gtgggcgaggggccgattgaggccatcatcgaggcacgtaataaagacggttatttccgc
gagctgtttgatctctgcgcgcgcaccgacaccaaaaagcttaaccgtcgggtactggaa
aagctgatcatgtccggggcgttcgaccgccttggcccgcaccgcgccgcgctgatgaac
tcgctgggcgatgcgcttaaagcggcggatcagcacgcgagagccgaagctataggccag
gcggatatgtttggcgtgctggcggaagagccggaacagattgaaaaatcctacgccaac
tgccagccatggcctgagcagaccgtactggacggcgagcgggaaaccctggggctatac
ctcaccgggcaccccatcaaccagtacctgaaagagatcgaacgctatgtcggcggcatg
cgtctcaaagatatgcacccgacagagcgtggtaaagttatcacggctgcggggcttgtg
attgcttcgcgggttatggtcaccaagcgcggcaatcgtatcggcatctgtaccctggat
gaccgctccgggcgtcttgaggtgatgttattcaccgatgcgctggagaaataccagcat
ctgctggaacaagaccggatcctaatcgtcagcggacaggtcagctttgatgacttcagc
ggaggccttaaaatgaccgctcgcgaagtgatggacattgcagacgcccgcgaaaagtat
gcgcgtgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccatcgttcgggaaccattccagtacatctctactatcag
agggcggatgcgcgcgcgaggttgcgttttggcgcaacgtggcgtgtctctccgagcgat
cgtttacttaacgatctgcgtggcctgataggttcggagcaggtggaactggagtttgac
taa
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