Atlantibacter subterraneus: NLZ15_18085
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Entry
NLZ15_18085 CDS
T08300
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
asub
Atlantibacter subterraneus
Brite
KEGG Orthology (KO) [BR:
asub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asub03016
]
NLZ15_18085 (thpR)
Enzymes [BR:
asub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
NLZ15_18085 (thpR)
Transfer RNA biogenesis [BR:
asub03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
NLZ15_18085 (thpR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
UTJ46720
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All DBs
Position
3813473..3814000
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AA seq
175 aa
AA seq
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MSEPKRLFFALEIPAPIQQQVIQWRTAQFAPEAGRPIAAANLHLTLAFLGEISDQKQQTL
MTLAGRIQQPAFTLTLDDAGHWPRSRVVWLGSRQPPRGLLQLANLLRAQAARSGCYQSPQ
PFHPHVTLLRNAAHQVAIPAPGFHWTFPVTEFVLYSSQFSQGRTQYQPLARWSLE
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagcccaaacggctattttttgcccttgagatacccgcgccgatccaacagcag
gtgatccagtggcgcaccgcgcagttcgccccggaggcgggccgccccatcgcggcggcg
aatcttcatctgacgctggcatttttaggcgaaatcagcgaccaaaagcagcaaacgctg
atgacgctggccgggcggattcagcagcctgcgtttaccctgacgctggacgatgccgga
cactggccgcgctcgcgggtggtgtggctgggtagccgccagccgccgcgcgggttattg
cagttggcgaatctattgcgcgcccaggccgcacgcagcggctgttatcaaagcccgcag
ccgtttcatccgcacgtgacgctgctgcgtaacgccgcgcatcaggtcgccatccccgcg
ccaggctttcactggacctttccggtgacggaatttgtgctttactcatcgcagttcagc
cagggacgcactcaataccagccgctggcgcgctggtcgctggaataa
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