Atlantibacter subterraneus: NLZ15_18105
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Entry
NLZ15_18105 CDS
T08300
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
asub
Atlantibacter subterraneus
Pathway
asub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NLZ15_18105 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asub03019
]
NLZ15_18105 (pcnB)
Enzymes [BR:
asub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
NLZ15_18105 (pcnB)
Messenger RNA biogenesis [BR:
asub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NLZ15_18105 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
UTJ49691
LinkDB
All DBs
Position
3816348..3817745
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AA seq
465 aa
AA seq
DB search
MFTRVANFCRKVLNREESEVDDIVSQPTITVIPREQHAISRKDISENALKVMYRLNKAGY
EAWLVGGGVRDLLLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMFGPEIIEV
ATFRGHHEENVSDRAISQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDY
VGGLQDLKLGIIRLIGDPETRYREDPVRMLRAVRFAARLDMQISPETGEPIPRLATLLND
VPPARLFEEALKLLQMGYGYNTYLLLREYSLFQPLFPTITRFFTEQGDSPMERIIAQVLK
NTDTRIHNDMRVNPAFLFAALFWYPQIETAQKIAQESGLSWNDAFALAMNDVLDEACRSL
AIPKRITALIRDIWQLQLRMSRRQGKRAWKLMEHPKFRAAYDLLELRAEAENNAELQRLA
RWWGEFQVSAPPAQKDMLNDLDDEPAARRRPRRPRRRAPRREGNA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atttttacccgagtcgctaatttttgccgcaaggtgttaaatcgcgaggaaagcgaggtt
gacgatatcgtcagccagcccaccattaccgtcatcccgcgcgaacagcacgctatttcc
cgcaaagatatcagtgaaaacgccctcaaggtgatgtaccgcctgaataaagcgggctat
gaagcgtggctggtcggcggtggcgtgcgcgatctgttgctgggcaaaaaacccaaagat
ttcgacgtgaccaccaacgccacgccggatcaggtccgcaaactgttccgcaactgccgc
ctggtgggccgccgtttccgcctggcgcacgtgatgttcggcccggaaattatcgaagtg
gcgacctttcgcggccatcatgaagaaaatgtcagcgatcgcgccatttcccaacgcggc
cagaatggcatgctgctgcgcgacaacattttcggctccatcgaagaagacgcccagcgc
cgtgatttcaccatcaacagcctgtattacagcgtggcggattttaccgtgcgcgattac
gtcggcggattgcaggacttaaagctcggcatcatccgtctgattggcgatccggaaacc
cgctaccgtgaagatccggtgcgcatgctgcgcgcggtgcgtttcgccgcccgtctggat
atgcagattagcccggaaaccggcgaaccgatcccgcgcctggcgacgctgttaaacgat
gtgccgcccgcgcgcctgtttgaagaggcgttaaagctgttgcagatgggctacggctac
aacacctatctgctgttgcgcgaatattcgctgttccagccgctgttcccgaccatcacc
cgtttctttaccgaacagggcgacagcccgatggaacgcatcatcgcgcaggtgctgaag
aacaccgatacccgcattcacaacgatatgcgcgttaacccggcgttcctgttcgccgcg
ctgttctggtatccgcaaattgaaaccgcacaaaaaatcgcccaggaaagcggcctgagc
tggaacgacgctttcgcgctggcgatgaacgatgtgcttgatgaagcctgccgttcgctg
gcgatcccgaaacgcatcaccgcgctaatccgcgatatctggcagctgcagctgcgcatg
tcgcgtcgtcagggtaaacgcgcctggaagctgatggagcatccaaaattccgcgccgcc
tacgacctgctggaactgcgcgctgaagcggaaaacaacgccgaattgcagcgtctggcc
cgctggtggggcgagttccaggtttccgcgccgccagcccagaaagatatgcttaacgat
ctggatgatgaaccggcggcacgccgccgtcctcgccgcccacgccgtcgtgcgccgcgc
cgtgagggcaatgcgtga
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