Atlantibacter subterraneus: NLZ15_19500
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Entry
NLZ15_19500 CDS
T08300
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
asub
Atlantibacter subterraneus
Pathway
asub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NLZ15_19500 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asub03019
]
NLZ15_19500 (pnp)
03016 Transfer RNA biogenesis [BR:
asub03016
]
NLZ15_19500 (pnp)
Enzymes [BR:
asub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NLZ15_19500 (pnp)
Messenger RNA biogenesis [BR:
asub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NLZ15_19500 (pnp)
Transfer RNA biogenesis [BR:
asub03016
]
Prokaryotic type
tRNA degradation factors
NLZ15_19500 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
S1_2
aRib
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_RRP5
KH_SLS1_2
DUF5813
Motif
Other DBs
NCBI-ProteinID:
UTJ46983
LinkDB
All DBs
Position
complement(4104443..4106587)
Genome browser
AA seq
714 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVHPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTADELKNSKLDLVVA
GTEGAVLMVESEAELLSEDQMLGAVVFGHDQQQVVIENINALVAEAGKPRWDWQPEAAND
ALNSRVAALAETRLSDAYRITDKQERYSQIDAIKSDVIAALQAEQAEGDALDENELNDIL
HAIEKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLG
TARDAQNLDELMGERTDNFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVMAVMPD
AERFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNFVV
LSDILGDEDHLGDMDFKVAGSREGISALQMDIKIEGITREIMQVALNQAKGARLHILSVM
EQAINAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKI
AATDGEKAKHAIRRIEEITAEIEVGRVYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADK
RVEKVTDYLQMNQEVPVKVLEVDRQGRIRLSIKEAAEPSQPAAAPEAPAAPQAE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgttcgtaaatttcaatatggtcaacataccgtcacgttagagacc
ggtatgatggcgcgccaggctaccgccgcagtgatggtaagcatggacgacaccgcagta
ttcgtgaccgttgtgggtcagaaaaaagccaaaccgggtcaggatttcttcccgctgacc
gttaactatcaagagcgtacctacgctgctggccgtatcccgggtagcttcttccgtcgt
gaaggccgcccgagcgaaggcgaaaccctgatcgcgcgcctgattgaccgtccggttcgt
ccgctgttcccggaaggcttcgttaacgaagttcaggtcatcgcgaccgtggtttccgta
aacccgcaggttcacccggacatcgtggcaatgattggcgcatccgcggccctgagcctg
tctggtattccgttcaacggcccaatcggcgctgcacgcgttggctatatcaacgaccag
tacgtgctgaacccgacggctgacgagctgaaaaacagcaagctggatctggtggttgcc
ggtaccgaaggcgctgtactgatggttgaatccgaagctgaactgctgagcgaagaccag
atgctgggcgcagtagtgtttggccacgatcaacagcaggttgttatcgaaaacatcaac
gccctggtcgccgaagcgggcaaaccgcgttgggactggcagccggaagccgctaacgac
gcgttgaacagccgcgttgctgcgctggctgaaacgcgtctgagcgacgcttaccgcatc
accgacaaacaagaacgttattcccagatcgacgcgattaaatccgacgtcatcgctgcg
ctgcaggctgaacaggctgaaggcgacgcgctggatgaaaacgagctgaacgacattctg
cacgctatcgagaaaaacgtagtacgtagccgcgttctgcgtggtgagccgcgtattgat
ggccgtgaaaaagacatgatccgtggtctggacgttcgtaccggcgtactgccgcgtact
cacggttcggcactgttcacccgtggcgaaacgcaggcactggttaccgcaacgctgggg
actgcacgcgatgcgcagaacctggacgagctgatgggcgaacgtactgacaacttcctg
ttccactacaacttccctccgtactccgtgggtgaaaccgggatggtgggctcgccgaag
cgtcgtgaaatcggccatggtcgcctggcgaaacgcggcgtgatggcagttatgccggat
gcagagcgcttcccgtacaccgttcgcgtggtgtcggaaatcaccgaatccaacggttct
tcttccatggcttccgtgtgtggcgcatctctggcgctgatggacgcgggcgtgccgatc
aaagccgccgttgcgggtatcgcaatgggtctggtgaaagaaggcgacaacttcgtggtg
ctgtccgacattctgggtgatgaagatcacttgggcgacatggactttaaagtagccggt
agccgtgaaggtatctccgcgctgcagatggatatcaaaatcgaaggcatcacccgcgaa
atcatgcaggtggcactgaaccaggctaagggcgcgcgtctgcacatcctgagcgtaatg
gaacaggctatcaacgcaccgcgtggcgatatctctgaattcgctccgcgtatccacacc
atcaagatcaacccggacaagatcaaagacgtgatcggtaagggcggttctgtgatccgt
gcgctgaccgaagaaaccggcaccaccatcgaaattgaagatgacggcaccgtgaaaatc
gcggctaccgacggtgaaaaagccaaacacgctattcgccgtatcgaagagatcaccgct
gaaatcgaagtgggtcgcgtttataacggtaaagtcacccgtatcgttgacttcggtgcg
tttgttgccattggcggcggcaaagaaggcctggtacacatttcccagatcgctgacaag
cgcgttgagaaagtaactgattatctgcagatgaatcaggaagtgccggtcaaagttctg
gaagtggatcgccagggccgtatccgtttaagcattaaagaagcagccgagccgtctcag
ccggcggccgcaccggaagctccggcagcaccgcaagctgaataa
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