Atlantibacter subterraneus: NLZ15_19510
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Entry
NLZ15_19510 CDS
T08300
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
asub
Atlantibacter subterraneus
Brite
KEGG Orthology (KO) [BR:
asub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asub03016
]
NLZ15_19510 (truB)
Enzymes [BR:
asub01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NLZ15_19510 (truB)
Transfer RNA biogenesis [BR:
asub03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NLZ15_19510 (truB)
Prokaryotic type
NLZ15_19510 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UTJ46985
LinkDB
All DBs
Position
complement(4107242..4108186)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPGGLSSNDALQKVKRLYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGNIVEERPVTFSAHELESALESFRGETQ
QVPTMFSALKYQGKPLYEYARQGIVVPREARPITVYELLFIRHEGLELELEVHCSKGTYI
RTIIDDLGEKLGCGAHVSYLRRLAVSKYPVERMVTLEQLTALRAQADEEGVDLSVVLDPL
LMPMDSPASDFPVVNIPPVTAGYFKNGQPVRVADVPLHGLVRVTEGDEQKFIGMGEIDDE
GRVAPRRLVVEYHD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgtgatgtgcatggcgtgttgttgctggataagccc
ggcgggctctcgtccaacgacgcgctgcaaaaagtcaaacgcctctacaatgccaaccgg
gcagggcataccggcgcgctggatccgttggcgaccggtatgttgccgatttgccttgga
gaggcgacgaagttttcccagtatctgcttgattccgataagcgttatcgcgtaattgcg
cggctcgggcagcgcaccgatacctcggacgctgacggcaatatcgtcgaggaaaggccg
gtaaccttttccgcacacgagctggaaagcgcactggagagtttccgtggtgagactcaa
caggtcccgaccatgttctcggcgctgaagtatcagggcaaaccgctgtacgaatatgcg
cgtcaggggattgtggtgccgcgtgaagcgcgtccgatcaccgtttatgagctgctgttt
attcgtcatgaagggctggaactggagctggaagttcactgctccaagggcacttatatt
cgcaccatcattgacgatctgggtgaaaagctcggctgcggcgcgcatgttagctatctg
cgtcggcttgcggtgagtaaataccctgtcgaacgcatggtgacgctggagcagctgact
gcgctgcgcgctcaggcggatgaagaaggcgttgatttgtcggtagttcttgacccgctg
ttaatgccgatggacagtccggcttcggatttcccggtggtgaatattccacctgtgact
gcgggctattttaaaaatggccagccggtacgcgttgcagacgtgccgctgcacggcctg
gtgcgcgtaaccgaaggcgatgaacagaagtttatcggcatgggtgaaattgatgacgag
ggacgcgtcgcgccccgtcgtctggtggtggaataccacgactaa
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