Atlantibacter subterraneus: NLZ15_21155
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Entry
NLZ15_21155 CDS
T08300
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
asub
Atlantibacter subterraneus
Pathway
asub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NLZ15_21155 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asub03019
]
NLZ15_21155 (recQ)
03400 DNA repair and recombination proteins [BR:
asub03400
]
NLZ15_21155 (recQ)
Enzymes [BR:
asub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NLZ15_21155 (recQ)
Messenger RNA biogenesis [BR:
asub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NLZ15_21155 (recQ)
DNA repair and recombination proteins [BR:
asub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NLZ15_21155 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UTJ47281
LinkDB
All DBs
Position
complement(4459327..4461156)
Genome browser
AA seq
609 aa
AA seq
DB search
MAQAEVMNQESLAKQVLQETFGYQQFRPGQETIINTVLDGRDCLVVMPTGGGKSLCYQIP
ALVKNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQTREEQQAVMAGCRTGQIRLLY
IAPERLMLDNFLDQLTFWNPVMLAVDEAHCISQWGHDFRREYALLGQLRDRFPNVPFMAL
TATADEATRRDIVHLLGLHDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQDQRGKSGI
IYCNSRAKVEDTAARLQSRGVSAAAYHAGLENNVRAEVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQESCSNCDICLDPPKQYDGLLDARKAL
STIGRVNQRFGMGYVVEVLRGANNQRIREMGHDKLPVYGIGKDQSHEHWVSIIRQLIHMG
FATQNIAQHSALQLTEAARPVLRGEIELKLAVPRVIALKPRVAQKSYGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLSPSEMLSVNGVGMRKLERFGKEFMALIR
SHADGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcagaagtaatgaatcaggagtcgctggcgaaacaggttttgcaggaaacc
tttggctaccagcagttccgccctggccaggaaaccatcataaataccgtgctggacggg
cgcgattgcctggtggtgatgccgaccggcggcggtaaatcgctgtgctaccagatcccg
gcgctggtgaaaaatggcctgacagtggtggtttcgccgctgatttcgttgatgaaagat
caggttgaccaactgctggctaacggcgtggcggcggcctgtctcaactccacgcaaacc
cgcgaagagcagcaggccgtgatggcgggctgccgcaccgggcaaatccgtttgctgtat
atcgcgcccgaacgcctgatgctcgacaatttcctcgatcagcttaccttctggaatccg
gtgatgctggcggtggatgaggcgcactgtatttctcagtgggggcacgatttccgccgc
gagtacgccttattaggccagctgcgcgatcgcttcccgaatgtgccgtttatggcgctg
actgcgacggcggatgaagctacgcgccgcgatattgtgcatctgctcggcctgcacgat
cccctgatccaaatcagcagctttgaccggcccaatatccgctacatgctgatggagaag
ttcaagccgctcgatcagctgatgcgctatgtgcaggaccagcgcggcaaatcgggcatc
atctactgcaacagccgggcgaaggtagaagataccgccgcgcgtctgcaaagccggggc
gtcagcgcggcggcctatcacgccgggctggaaaacaacgtccgtgccgaggtgcaggaa
aaattccagcgcgacgatttacaaatcgtggtggcgactgtggctttcgggatgggcatc
aacaagccaaacgtgcgtttcgtggtgcacttcgacattccccgcaatatcgaatcctat
tatcaggaaacaggccgcgccgggcgtgacgggctgcccgctgaagcgatgctgttctac
gatccggcggatatggcctggctgcgccgctgccttgaagaaaaacccgcaggacagctt
caggatatcgagcgccataaacttaacgccatgggcgcgtttgccgaggcgcaaacctgt
cggcgtctggtgctgctgaattattttggcgaagggcgtcaggagtcgtgcagcaactgc
gatatctgccttgatccgccgaagcagtacgatggtttgctggatgcgcgcaaggcgctt
tcgacgattggacgagttaaccagcgtttcgggatgggctatgtggttgaagtgctgcgc
ggggccaataaccagcgtattcgcgagatgggtcatgacaaattgcctgtttatggcatc
ggtaaagatcagagccatgagcactgggtgagcattattcgccagcttattcacatgggg
tttgctacccaaaacatcgctcagcattcagcgttgcagcttactgaagcggcgcgtcct
gtgctgcgcggggagattgaactgaagctggccgtaccgcgtgtcatcgccctgaaaccg
cgcgtggcgcagaaatcctacggcggcaattacgatcgtaagctgttcgctaagctgcgt
aagctgcgcaaagccattgccgatgaagaaaacattccgccatacgtggtgtttaacgac
gccacgctgattgaaatggccgagcaaatgccgctcagccccagcgagatgctcagcgtc
aacggcgtggggatgcgtaaactggagcgcttcggaaaagagtttatggcgctgattcgc
agccatgcggatggcgacgacgaagagtag
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