Atlantibacter subterraneus: NLZ15_21225
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Entry
NLZ15_21225 CDS
T08300
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
asub
Atlantibacter subterraneus
Pathway
asub00300
Lysine biosynthesis
asub00470
D-Amino acid metabolism
asub01100
Metabolic pathways
asub01110
Biosynthesis of secondary metabolites
asub01120
Microbial metabolism in diverse environments
asub01230
Biosynthesis of amino acids
Module
asub_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
asub00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NLZ15_21225 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NLZ15_21225 (dapF)
Enzymes [BR:
asub01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NLZ15_21225 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
UTJ47293
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Position
complement(4472585..4473409)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPDLDFHY
RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVNEDDLVRVNMGE
PNFEPSQVPFRANKAEKTYIMRAAEQTIMCGVVSMGNPHCVLQVDSVDTAAVETLGPVLE
NHERFPERANIGFMQVVTTNHIRLRVFERGAGETQACGSGACAAVAVGITQGLLAEQVRV
ELPGGLLDIAWKGPGHPLYMTGPAAHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttttccaaaatgcatggcctgggtaatgactttatggtcgtcgacgcggtcaca
cagaacgtcttcttttcgccagaattaatccgccgcctggcggatcgccatcttggggtt
ggctttgatcagctgctggtggtagagccgccttacgatcccgatctcgattttcattac
cgtatctttaatgccgacggcagcgaggtttcccagtgcggaaacggcgcgcgctgcttc
gcgcgttttgtgcgcctgaaagggctgaccaacaaacgcgatatccgggtcagcactgcc
aacgggcgcatggtgctgacggtcaacgaagatgatttagtgcgagtgaacatgggcgag
ccgaattttgagccgtcccaggtgccgtttcgcgccaacaaggcggaaaagacctatatc
atgcgcgccgccgagcaaaccataatgtgcggcgtggtttccatgggaaacccgcactgc
gtgttgcaggtcgacagtgttgatactgccgccgtagaaacgcttggcccggttctggaa
aatcatgagcgttttcctgagcgggcgaatatcggctttatgcaggtggtgacgacaaat
cacatccggctgcgcgttttcgaacgcggcgcgggtgaaacccaggcctgcggcagcggc
gcgtgtgctgcggtggcggtggggatcacccaggggttactggccgagcaggtgcgggtc
gagttgcccggcggcctgctggatatcgcctggaaagggccagggcatccgctgtatatg
acgggcccggccgctcatgtttacgatggatttatacatttatga
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