Atlantibacter subterraneus: NLZ15_21755
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Entry
NLZ15_21755 CDS
T08300
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
asub
Atlantibacter subterraneus
Pathway
asub00541
Biosynthesis of various nucleotide sugars
asub01100
Metabolic pathways
asub01250
Biosynthesis of nucleotide sugars
Module
asub_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
asub00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NLZ15_21755 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
asub01005
]
NLZ15_21755 (rfaD)
Enzymes [BR:
asub01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
NLZ15_21755 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
asub01005
]
Core region
NLZ15_21755 (rfaD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
UTJ47383
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Position
4583547..4584479
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AA seq
310 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLTIADYMDKEDFLIQI
MAGEEFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKEVLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSDGFKRDFVYVGDVAAVNLWFWENGVSGIFNLGTGRA
ESFQAVADAALAYHQKGSLEYIPFPEKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVA
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcattgttaccggcggcgctggatttatcggcagcaacattgttaaggcgttgaac
gacaagggcatcaccgacattctggtggtcgataaccttaaagacggcaccaaattcgtt
aacctggttgacctgaccatcgccgattacatggataaagaagacttccttatccagatt
atggcgggtgaagaatttggcgatatcgaggcgattttccacgaaggcgcatgctcttcc
accaccgagtgggacggcaagtacatgatggataacaactatcagtactccaaagaagtg
ctgcactactgcctggagcgcgaaattccgttcctgtacgcctcttctgccgccacttac
ggcggacgcacctccgactttattgagtcccgcgaatacgagaagccgctgaacgtttac
ggctactccaaattcctgttcgacgaatacgtgcgccagatcctgccggaagccaactcg
caaatcgtcgggttccgctacttcaatgtctacggaccgcgtgaaggccacaaaggcagc
atggcgagcgtggcgttccatctgaacacccagttgaacaacggcgagagcccgaaactg
tttgaaggcagcgacggctttaagcgcgatttcgtctacgtgggcgacgtggcggcggtc
aacctgtggttctgggaaaacggcgtatccgggattttcaacctcggcacgggccgtgcg
gaatccttccaggccgtggccgatgctgcgctggcataccaccagaaaggcagcctcgaa
tacatcccattcccggaaaaactgaaaggccgctatcaggcgtttactcaggcagattta
actaatctgcgcgccgctggctacgataagccgttcaagaccgtcgccgaaggcgtggcg
gaatatatggcctggctgaaccgcgacgcgtaa
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