KEGG   Atlantibacter subterraneus: NLZ15_22070
Entry
NLZ15_22070       CDS       T08300                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
asub  Atlantibacter subterraneus
Pathway
asub03030  DNA replication
asub03410  Base excision repair
asub03420  Nucleotide excision repair
asub03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:asub00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NLZ15_22070 (polA)
   03410 Base excision repair
    NLZ15_22070 (polA)
   03420 Nucleotide excision repair
    NLZ15_22070 (polA)
   03440 Homologous recombination
    NLZ15_22070 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:asub03032]
    NLZ15_22070 (polA)
   03400 DNA repair and recombination proteins [BR:asub03400]
    NLZ15_22070 (polA)
Enzymes [BR:asub01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NLZ15_22070 (polA)
DNA replication proteins [BR:asub03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     NLZ15_22070 (polA)
DNA repair and recombination proteins [BR:asub03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     NLZ15_22070 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NLZ15_22070 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: UTJ47446
LinkDB
Position
complement(4653086..4655872)
AA seq 928 aa
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLMQYQPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAREAEKAGRPVLISTGDKDMAQLVTPGITLINTMTNTILGPEEVVTKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQGLLQGLGGLDTLFAEPEKIAGLSFRGAKTMAAKLADHK
EVAYLSYQLATIKTDVELELTCDQLEVKQPTVDVLVDLFKKYEFKRWTADVEAGKWLQAK
GAKPAAKPLETIVINEEPDEPAVALSYDSYVTILDEKTLTEWITRLEKAPVFAFDTETDS
LDNHSARLVGFSFATEPGIAAYVPVAHDYIDAPEQLTCERVLELLKPLLESESARKVGQN
LKYDRGVLQNYGIELRGIAFDTMLESYILDSVAGRHDMDSLADRWLKHKTITFEQIAGKG
KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPKLEKEKGPRHVFETIEMPLVPVLSRV
ERNGVKIDPAVLHRHSEELTLRLAELEQKAHDIAGEPFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILQYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH
QAVAATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPQDYVIVSADYSQIELRIMAHLSRD
KGLLSAFAEGKDIHRATAAEVFGLPLESVSGEQRRSAKAINFGLIYGMSAFGLSRQLNIP
RKESQKYMDLYFERYPGVREYMERTRQQAKEQGYVETLDGRRLYLPDIKSSNAARRAGAE
RAAINAPMQGTAADIIKRAMIAVDAWLEKEQPRVKLIMQVHDELVFEVHKDDVEAVSEKI
HELMENSMKLDVPLLVEVGSGENWDQAH
NT seq 2787 nt   +upstreamnt  +downstreamnt
atggttcagatcccagaaaatcctcttatcctcgttgatggctcttcttacctgtatcgg
gcctatcacgcctttccgccgctgaccaatagcgcaggcgagccgaccggggcaatgtac
ggcgtacttaatatgctgcgtagcctgttaatgcagtatcagccgactcacgcggcggta
gtctttgacgccaaaggcaaaacctttcgtgatgagctgttcgagcattacaaatcgcat
cgtccgccaatgcctgacgatcttcgtgcgcagatcgagccgctgcacgccatggtcaag
gccatgggtttgccgctgctggcggtttccggcgtagaggccgacgacgtcatcggcact
ctggcgcgtgaagcggaaaaagcgggccgtccggtgctaatcagcaccggcgataaagac
atggctcagctggttaccccaggcattacgctgatcaacaccatgaccaataccattctc
ggtccggaagaagtggtgacgaaatacggcgtgccgccggaattgattatcgatttcctg
gcgctgatgggcgattcctcggataacattccgggcgtgcctggcgtgggcgagaaaacc
gcgcagggcttgctgcaaggcctgggtggcctggatacgctgtttgccgaaccggaaaaa
atcgctggcctgagcttccggggtgccaaaaccatggccgctaagcttgccgatcacaaa
gaggtggcatacctctcttaccagctcgccaccatcaaaaccgatgtggagcttgaactg
acttgcgatcagcttgaagtaaaacagccgacggtggacgtgctggtcgatctgttcaag
aaatatgaattcaagcgctggaccgcggatgttgaagccggtaaatggctgcaggcgaaa
ggcgcgaaacccgcggcgaaaccgctggaaactatcgttatcaacgaagagcctgacgaa
ccggctgtggcactctcttatgacagctacgtcaccattctggatgagaaaacgctcacc
gagtggattacccgtcttgagaaagccccggtctttgcctttgataccgaaacggacagc
ctggacaaccactccgcacggctggtgggcttctcgttcgcaaccgaaccggggattgcg
gcctatgtgccggtggcgcacgattatattgatgcgccggaacagctgacctgcgaacgc
gtgctggaattattaaagccgctgcttgaaagcgaaagcgcccgtaaagtcgggcaaaac
ctcaaatacgatcgcggcgtgttgcagaattacggtattgaactgcgcggtattgccttc
gacaccatgctggaatcgtacattctggatagtgtagcgggccgtcatgatatggatagc
ctggccgatcgctggctgaagcataaaaccatcacgtttgaacagattgctggcaaaggc
aaaaaccagctgacttttaaccagattgcgctggaagaagcagggcgctatgccgccgag
gatgcagacgtcacgctgcagctgcatctcaaaatgtggccgaagctggagaaagaaaaa
gggccgcgccacgtttttgaaaccatcgagatgccgctggtgccggtgctgtcgcgcgtt
gagcgtaacggcgtaaaaatcgatccggcggtattgcaccgtcattccgaagaattaacg
ctacgcctggccgagctggaacaaaaagcccatgacattgccggcgaaccgtttaatctc
tcgtccaccaaacagctgcaaaccattctgtttgaaaagcagggcattaagccgctgaag
aaaacgcctggcggcgcgccgtctacgtcggaagaggtgctggaagagctggcgctggat
tacccgctgccgaaagtgattctgcaatatcgcgggctggctaagctcaaatctacctac
accgataaactgccattgatgattaacccgaaaaccgggcgcgtgcatacctcgtatcat
caggcggttgcggctaccggccggctctcgtctaccgatccaaacctgcaaaacattccg
gtgcgcaatgaagaaggacgccgaattcgccaggcatttattgcgccgcaagactatgtg
atcgtttctgcggactactcgcaaatcgaactgcgcatcatggcgcacctttcccgcgat
aaaggcttactgagcgcctttgccgaaggtaaggatattcaccgcgccacggcagcggaa
gtatttgggttgccgctggaaagcgtctccggcgaacagcgccgcagcgctaaagcgatc
aactttgggctgatctatggcatgagcgcgtttggcctgtcgcgccagctcaatattccg
cgcaaagaatcacaaaagtacatggacctttacttcgagcgctaccccggcgtgcgcgag
tatatggagcgtacccgccagcaggcgaaagagcagggctatgttgaaacgctggatggc
cgccgtctgtatcttccggacatcaaatccagtaacgcggctcgccgcgccggtgcagag
cgcgcggcgatcaacgccccaatgcagggtaccgccgccgatatcatcaaacgcgccatg
attgccgtagacgcctggcttgagaaagagcagccgcgcgtcaaactgatcatgcaggta
cacgatgaactggtgtttgaagtacataaagatgatgtggaagccgtgtctgagaagatc
catgaactcatggaaaacagtatgaagcttgatgtgccgttgctggtggaagtgggcagc
ggtgaaaactgggatcaggctcactga

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