Acinetobacter suaedae: F2A31_03245
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Entry
F2A31_03245 CDS
T10231
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
asue Acinetobacter suaedae
Brite
KEGG Orthology (KO) [BR:
asue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asue03016
]
F2A31_03245
Enzymes [BR:
asue01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
F2A31_03245
Transfer RNA biogenesis [BR:
asue03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
F2A31_03245
Prokaryotic type
tRNA splicing ligases
F2A31_03245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
QER38769
UniProt:
A0A5P1UPC5
LinkDB
All DBs
Position
complement(681276..682481)
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AA seq
401 aa
AA seq
DB search
MGIQKILNADAQYGVPVKIFTRDIDQESIEQLKKMAQLQFVYSHIAVMPDVHVGKGATVG
SVIPTKQAIIPAAVGVDIGCGMNAIRLNLKADQLPDNLAPIRHAIERKVPVGFEIHKQVK
AKASTIIPLEKSLQPIIKKHSGLIRMLRKFDATWQKQLGTLGGGNHFIELCLDENQDVWV
MLHSGSRGLGNVIGTYFIELAKKEAQHRFGHVPDKDLSYFAQGSNSFDDYVEAVEWAQTY
AFENRREMMRLILEAIRPLLPPFQMTKEAINCHHNYISQENHFGETLFITRKGAIRAGQD
EFGIIPGSMGARSYIVRGKANPESFCSCSHGAGRKMSRNKAKLLFNQDDLIQQTQGIECR
KDLGVIDEIPSAYKDIDEVMANQSDLIEVVHTLKQILCIKG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgggcatacaaaaaatactcaatgcagatgctcaatatggcgttccagtgaaaatattc
actcgcgatattgatcaggaaagcattgaacaactcaagaaaatggcacaacttcaattt
gtttattcacatattgcggtgatgcctgatgtacatgtgggtaaaggtgcaaccgttggc
agcgtcatacccacaaaacaagctattatccctgcagctgttggagtggatattggttgt
ggcatgaatgcgatccgcttaaacctcaaagcggatcaactacctgacaatcttgctccc
atacgccatgcgattgaacgcaaggttcctgtaggttttgagatacacaaacaagtcaaa
gcaaaagcttcaactattattccattggaaaaaagcttgcaaccgattatcaaaaagcat
tctggtttaattcgaatgctaagaaagtttgatgcaacatggcaaaaacaactgggaaca
ctaggtggaggcaatcactttattgagctctgtcttgatgaaaatcaggatgtctgggtc
atgctccattctggcagtcgcggtttaggcaatgtcattggcacctattttattgagctt
gccaagaaagaagcccaacatcgttttggacatgtaccagacaaagacctgagctatttt
gctcaaggttcaaatagctttgatgattatgttgaagctgtggaatgggcacagacctat
gcttttgaaaatcgtcgtgaaatgatgcgtttgatactagaagcaatccgccctcttcta
ccaccctttcaaatgacgaaagaagcgatcaattgtcatcacaattatatcagtcaggaa
aatcattttggtgaaacactattcattacacgtaaaggtgcaattcgggcaggtcaagat
gaattcggcattatccctggttcaatgggcgctcgctcttatattgttaggggcaaagcc
aatcctgaatctttttgttcatgttcacatggcgcaggaaggaaaatgagtcgcaataaa
gcgaagctattgtttaaccaagatgatctcattcaacaaactcaaggtattgagtgtcgt
aaagacctaggtgttatcgatgaaattcccagcgcttacaaagatatagacgaagtcatg
gccaatcaatctgatttaattgaagtcgtacacacactgaagcaaattctatgtattaaa
ggataa
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