Acinetobacter suaedae: F2A31_06985
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Entry
F2A31_06985 CDS
T10231
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
asue Acinetobacter suaedae
Brite
KEGG Orthology (KO) [BR:
asue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asue03016
]
F2A31_06985
Enzymes [BR:
asue01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
F2A31_06985
Transfer RNA biogenesis [BR:
asue03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
F2A31_06985
Prokaryotic type
tRNA splicing ligases
F2A31_06985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
OrtA
Motif
Other DBs
NCBI-ProteinID:
QER39469
UniProt:
A0A5P1URC5
LinkDB
All DBs
Position
complement(1494054..1495325)
Genome browser
AA seq
423 aa
AA seq
DB search
MSVVEQINQQAQFEQEQQQRAYQVLQNENSMPVKMWTNGVLVDDNSKQQLLQTAQMPFIY
KWMAVMPDVHFGLGATIGSVIPTKGAIIPAAVGVDIGCGMMATRTSLTASDLPDNLHALR
TELERLIPHGMTKGRGRDRGSWENPPEMVDQAWADLVADFELICAKHPRLKNTNNRKQLG
TLGTGNHFVEVCLDEHDHVWIMLHSGSRGVGNAIGNHFIELARKDMQKHFINLPNKDLAY
LVEGTDHFDDYWFAVGWAQRFAMKNREIMMQSAIKALATIIPKPFQARLEAVNCHHNYVE
KEEHYGEEVMVTRKGAVSAKLGQYGIIPGSMGAKSFIVRGLGNQESFCSCSHGAGRVMSR
AEAKRRFTVEDQIAQTEGVECRKDAAVIDEIPSAYKPIEDVMKAQSDLVEVVYTLRQVVC
VKG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgttgaacaaatcaaccaacaagctcaatttgaacaagaacagcaacaacgt
gcttatcaagtacttcaaaatgaaaacagcatgcctgtaaaaatgtggaccaatggcgtc
cttgttgatgacaactcaaaacaacaattgctacaaacagctcaaatgccttttatttat
aaatggatggctgtgatgccagacgttcactttggtttaggtgcaacgattggaagtgtc
attccaaccaaaggtgcgattatccctgctgctgtcggtgttgatattgggtgtggaatg
atggcaactcgtaccagcctaactgcttcagatctacctgataacttacatgctttacgt
actgaacttgaacgtttgatcccacatgggatgaccaaaggccgaggacgagatcgtggt
tcttgggaaaatccacctgaaatggtggatcaagcttgggcagatttagttgccgacttt
gagttgatttgtgccaagcatcctcgcctaaaaaacaccaacaaccgaaaacagttagga
actttaggtacaggaaatcacttcgtcgaagtctgtttggatgaacatgatcatgtttgg
attatgttgcactcaggttctcgtggtgtgggtaatgccatcggtaatcattttattgag
cttgctcgcaaagatatgcaaaagcactttattaacttacccaacaaagatttagcatat
ttagtcgaaggaacagatcattttgatgattactggtttgctgtaggttgggcacaacgc
ttcgcgatgaaaaaccgtgaaatcatgatgcaatctgcgattaaagccttagcaaccatt
atcccgaaaccgttccaagcacgtttggaagccgtaaactgccaccataactatgtggaa
aaggaagaacattacggcgaagaagtgatggtgacccgtaaaggcgctgtaagtgccaaa
cttggacaatatggaattatcccaggttcaatgggtgcaaagtcttttatcgttcgtggg
cttggaaatcaggaatcgttctgttcatgttcacatggtgcaggacgtgtaatgagccgt
gctgaagcaaaacgtcgctttactgtagaggatcagattgcgcaaactgaaggtgtagag
tgccgaaaagatgcggctgtgattgatgaaattccatcggcttataaaccgattgaagat
gtgatgaaagcacaaagcgatttggttgaagtggtttatacattaagacaagttgtttgt
gttaaggggtga
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