Acinetobacter suaedae: F2A31_13580
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Entry
F2A31_13580 CDS
T10231
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
asue Acinetobacter suaedae
Pathway
asue03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asue00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F2A31_13580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asue03019
]
F2A31_13580
03009 Ribosome biogenesis [BR:
asue03009
]
F2A31_13580
Enzymes [BR:
asue01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
F2A31_13580
Messenger RNA biogenesis [BR:
asue03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
F2A31_13580
Ribosome biogenesis [BR:
asue03009
]
Prokaryotic type
rRNA processing factors
F2A31_13580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
QER40673
UniProt:
A0A5P1UX32
LinkDB
All DBs
Position
2917786..2921154
Genome browser
AA seq
1122 aa
AA seq
DB search
MKRMLINATHAEEVRVALITGNRLYDFDLENRTREQKKSNIYKGHVTRVEPSLEAVFVEY
GAQRQGFLSMREIANSYFKADPRQTSNIRELITEGTELLVQVEKEERGNKGAALSTFISL
AGRYLVLMPNNPKGGGISRQISGSVREELKEILATLNIPRGMSVIVRTAGIGRTQEELQL
DLQHLLDLWAQIQSSASTGPSPMLVHQEAGVVTRAIRDYLRDDVGEILIDSEQAYNEAYN
FVKAVMPRQLDKLKTYTLNEPLFAHFGIESQIQTAYEREVKLPSGGSIVIDQTEALVSID
INSAKSTRGHDVEETALNTNLEAAEEIARQLRLRDIGGLVVIDFIDMTKDRNQRMVEAKL
REATQSDRARIQFGQLSRFGLMEMSRQRLRPSLEEATGYVCPRCHGTGMVRDLRSLSLSI
MRKVEEIALRERQGEVQVEVPVEIAAFLLNEKRHSLVYLEQTSNVRVTVLPHPHLETPHY
QIQYNPAGFAPSSYERTEATRSSEKELGYESSEWHLEDAEHVHAAPAQVQTTAPQKKNAQ
PQSAAQPKQAQVPAQKSASPCAWLENLFVQKQAQTIDQSRSAQNAAAAIEQMINNGAVSR
GQFGQVNAPVITETTVPAANNVYISQNPVKQETRESFDKDEKPHRPNQNQKKRKHKEQRE
QHAHAHEQQNQVHEEVVQLSRQEQRHEQRELKRQQKRQQSQEPQNQQQHHDATNGNESAP
VPRRDRNNQQRPNRPNRHRDQSVLNETPAETVVNPQQVKVDVIDTPRAEPMSTALIVNID
QGQSEIVALNQQQAPAKKVEATPVVEQKETTPVAETEAVVAEEAPAIEAAQAPVKRASND
PRSRRRQRGAQTAQKAAVPKIAPSQIPTLGQYTLGSLIRHVYGEDCTILIEQFGLITTFN
RALQKFTEQHAASLMTEETVVEEKRPVTRDAELPTQKIAAEAEPAPVLDLTPPKAPAARV
ANDPRERRRLAKLAAEQAKEAHLASNAAPAVVENAEIASETKTKEVIAVEAPTSEVSPAP
EQQPLELAAAEAKVASEAEIVPVAEETQPEPQQPTTEESTTVVETVEKTTKVEKVVEKPE
SAEKTETADSEEDEAAKIEKEKSSRPRRPRGRPPKKTTPSNE
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtatgttgattaatgcaacccacgcagaagaagtccgcgttgcacttatcact
ggtaatcgtctttacgatttcgatttagaaaatcgtactcgtgaacaaaaaaaatcaaat
atctataaaggccatgtcactcgcgttgagccatctttagaagcggttttcgttgagtat
ggcgcacagcgtcaaggctttttgtctatgcgagaaattgcaaactcgtatttcaaggct
gatcctcgtcaaacctcaaatattcgtgaactcattactgaaggcacggaattattggtc
caagttgaaaaagaagagcgtggcaacaaaggtgctgcgctttcgacatttatttcactt
gctggtcgttatttagttctcatgccaaacaatccgaaaggtggcggtattagtcgtcaa
atttcgggttcagttcgtgaagaactcaaagaaattttagcgaccttaaatatccctcgt
ggcatgagcgtcatcgttcgtaccgcaggtatcggacgcactcaagaagaattacaactc
gatctacaacacttgcttgacctttgggcacaaatccaaagctctgcaagcactggtcct
tcaccaatgctcgttcatcaagaagctggtgttgttacgcgcgcgattcgtgactattta
cgcgatgatgtgggcgagattttgattgatagcgaacaagcttataacgaagcgtataac
tttgttaaagcagtaatgccgcgtcaactcgacaaattaaaaacctatactttaaatgag
ccgctattcgctcattttggtattgaaagccaaatccagaccgcttatgaacgtgaagta
aaacttccgtctggtggttctatcgtgattgaccaaactgaagcgttggtttcaatcgat
atcaactcagcgaaatcaacacgtggtcatgatgttgaagaaacagctttaaataccaac
ttagaagcagctgaagaaattgcacgtcaacttcgtttacgtgatattggtggcttggtt
gtgatcgatttcatcgacatgaccaaagaccgcaatcaacgtatggtggaagcgaaactt
cgtgaagcaacacaaagtgatcgcgcacgtatccagttcggtcaactgtcacgctttggt
ctcatggaaatgagccgtcaacgcttacgtccttcgttagaagaagcgactggctatgtt
tgccctcgttgccatggtacaggtatggtacgtgacttacgttcactttcactatcgatc
atgcgtaaggtcgaggaaattgcattacgtgagcgccaaggtgaagttcaagttgaagtt
cctgtagaaatcgcagccttcttattgaatgaaaaacgtcatagccttgtttatcttgaa
caaacttcaaatgtacgtgtcactgtattgcctcacccgcatttagaaacaccacattac
caaatccaatacaatccagcaggctttgccccttctagctatgaacgtaccgaagcaacc
cgttcaagtgaaaaagaacttggctatgagtcatcagaatggcatctagaagatgctgaa
cacgttcatgctgctcctgcacaagttcaaactactgctccgcagaaaaaaaatgctcaa
ccacagtctgctgctcaaccgaagcaagcacaagtgcctgcgcagaaatcagcaagtcct
tgtgcttggttagaaaacctatttgttcaaaaacaagcacaaacgattgatcaatctcgt
tctgcacaaaatgcggcagcagcgattgagcaaatgatcaacaatggcgcggtgagccgc
ggtcaatttggtcaagtaaatgctccagtcatcactgagactacggtaccagctgcaaac
aatgtatatatttcacaaaaccctgtgaaacaagaaacgcgtgaatcatttgataaagat
gaaaaaccacatcgtccgaatcaaaatcaaaagaaacgcaaacataaagaacagcgtgaa
caacatgcacatgctcatgagcaacaaaaccaagtgcatgaagaagttgtacaattatca
cgtcaagaacaacgccatgagcaacgtgagctaaaacgtcaacaaaaacgtcagcagtca
caagaacctcaaaatcaacaacagcatcatgatgctacaaatggaaatgaatcagcgcct
gttccacgtcgtgaccgcaataatcaacaacgtccaaatcgcccaaatcgccatcgtgac
caaagtgttttaaatgaaacaccagcagaaacagtggttaaccctcaacaggtgaaagtg
gatgtgatcgatacacctcgtgcagagcctatgagtactgctttgattgtgaatattgat
caaggacaaagtgaaattgttgcactcaaccaacagcaagcgcctgcgaaaaaggttgaa
gccactcctgtcgtcgaacaaaaagagacgactccagttgctgaaacagaagctgttgtg
gctgaagaggcaccagcaatcgaagcagcacaagcgccagtaaaacgtgctagcaatgat
ccacgttcacgtcgtcgccaacgtggtgcgcaaacagctcagaaagcagctgtacctaaa
attgcgccatcgcaaatcccaacattgggacaatacacgcttggcagcttaatccgtcat
gtgtacggtgaagattgtacgatcttaattgagcaatttggtttaattaccacattcaac
cgtgcgttacagaagttcactgaacaacatgctgcatctttaatgacagaagaaactgtt
gttgaagaaaagcgtcctgtaacacgcgatgctgaactcccaacgcagaaaatcgctgca
gaagcagagccagcgccagtgctagacttaacgccacctaaagcaccggcagcacgtgtc
gcaaatgatcctcgtgaacgacgtcgtttggctaaacttgctgcagaacaagccaaagaa
gcacatcttgcttcaaatgctgcaccagccgttgtcgaaaatgcggaaatagcttctgaa
actaaaacaaaagaagttatagccgttgaagcaccgacatcagaggtttcccctgctcca
gagcagcaacctttagaacttgcagcagcagaagcaaaagtagcatctgaagcagaaata
gttcctgttgcagaggaaactcaaccagaacctcaacaacctacaacagaagagtcaaca
actgtagtagagaccgtagagaaaactacaaaagttgagaaagttgtggaaaaacctgaa
tcagcagagaaaactgaaactgccgattcagaagaggatgaagcagcgaaaatcgagaaa
gaaaaatcaagtcgccctcgccgtccacgtggacgaccaccaaagaaaaccacgcctagc
aatgaataa
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