Acinetobacter suaedae: F2A31_14210
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Entry
F2A31_14210 CDS
T10231
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
asue Acinetobacter suaedae
Pathway
asue03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
asue00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F2A31_14210 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asue03021
]
F2A31_14210 (rpoC)
03400 DNA repair and recombination proteins [BR:
asue03400
]
F2A31_14210 (rpoC)
Enzymes [BR:
asue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
F2A31_14210 (rpoC)
Transcription machinery [BR:
asue03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
F2A31_14210 (rpoC)
DNA repair and recombination proteins [BR:
asue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
F2A31_14210 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QER40791
UniProt:
A0A5P1UV82
LinkDB
All DBs
Position
complement(3053452..3057645)
Genome browser
AA seq
1397 aa
AA seq
DB search
MKDLLDIMRKKTDSEGHAPVEFDRIRIGLASPEMIKSWSHGEVKKPETINYRTFKPERDG
LFCAKIFGPVKDYECLCGKYKRMKYKGVICEKCGVEVTTAKVRRERMGHIELASPVAHIW
FLKSLPSRIGLLLDMTLRDIERVLYFESYVVTDPGMTPFEKYQLLTDEEYYNALEEHGDE
FTAKMGAEAVQDLLKDIDLEAEIARLREEIPQTTSETKLKKASKRLKLMEAFKDSNNKPE
WMVMNVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNE
KRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVI
TVGPTLRLHQCGLPKKMALELFKPFIFAKLQASGQATTIKAAKKMVERETPEVWDVLASV
IRQHPVMLNRAPTLHRLGLQAFEPILIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLE
AQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAVNAKGEGMVFADTHEVNR
ALATGQVNLHARVKVRVHQTVINENGEREQQTIIVDTTPGRCLLWEVVPQGLSFDMINLE
MTKKNISKLINSCYRKLGLKDTVIFADQLMYLGFRQATRSGVSVGMEDMLIPPTKQVIID
KAETEVREIEQQFEQGFVTAGERYNKVVDIWARTNDQVAKAMMDNLSYTLVKNKQGEDEK
QKSFNSIYMMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVAQDLVITEPDCGTAGGLVMTPFIQGGDVIEPL
RDRVLGRVTAEDVRRASDDEVVLPRGTLIDEKIAAQLEEAGVDEVKVRSVIACESTFGVC
AKCYGRDLARGHLVNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAASRTSAANSVQVRNK
GTVRFHNVKTVQHAKGHLVSVSRSGEIGIADDLGRERERYKLPYGASILIKDGETVEAGG
IVATWDPHTHPLVTEVAGKARFSQIADGVTATSKTDDATGMTTVEILPVTARPASGKDLR
PAIVLDTTDGGEQFYFLPQNTIVTVRDGETIGVGDVIGRVPQESSRTRDITGGLPRVADL
FEARKPKEHAILAEVSGIVSFGKETKGKNRLVITPDDGSEIYEELIPKWRQINVFEGEHV
NRGETISDGPQNPHDILRLKGEVALTNYIVNEVQDVYRLQGVKINDKHIEVVVRQMLRKV
DITDGGDTSFIKGEQVDYIRVVQENQAVLAQNKFPAKFERQLMGITKASLSTDSFISAAS
FQETTRVLTEAAVTGKEDDLRGLKENVVVGRLIPAGTGLAYHLERRRQEAEAAEFELHND
FSEVDQAFSQALNSDQF
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttgctcgatatcatgcgtaagaaaacggattcagaaggtcatgcacctgtt
gaatttgaccgtatccgtattggtcttgcgtcaccagagatgattaagtcatggtctcac
ggtgaagttaaaaagcctgaaaccattaactaccgtacttttaaacctgaacgtgacggt
ttattctgtgccaaaatctttggtccagtaaaagattatgaatgcttgtgtggtaaatac
aagcgtatgaaatacaaaggcgtcatttgtgaaaaatgtggcgttgaagtaacaactgct
aaagttcgtcgtgaacgtatgggtcacatcgagcttgcttctccagtagcacacatttgg
ttcttgaaatcattaccgagccgtatcggtttgctgcttgatatgacattacgtgatatt
gaacgtgtattgtatttcgaatcttatgttgtaacagatcctggtatgactccgtttgaa
aagtatcaacttttaacagacgaagaatactacaatgcacttgaagaacacggtgatgaa
ttcactgcgaaaatgggtgcagaagcagttcaggatttattaaaagatatcgatcttgaa
gctgagattgcgcgtttacgtgaagaaattccacaaacaacctctgagacgaaacttaaa
aaagcgtcaaaacgtttgaaattgatggaagcattcaaagattcgaacaacaagcctgaa
tggatggtgatgaatgtacttccagtacttccaccagatctacgtccgcttgtaccactt
gaaggtggccgtttcgcgacttcagacttgaacgatttatatcgtcgtgtgatcaaccgt
aacaaccgtttgaagcgtcttcttgaccttgctgcgccagatatcatcgtacgtaacgaa
aaacgtatgttacaagagtctgttgatgcgttgcttgataacggtcgtcgtggtcgtgca
attacaggttcgaacaaacgtccattaaaatctttggcagatatgatcaaaggtaaacaa
ggtcgtttccgtcaaaacctacttggtaaacgtgttgactattctggtcgttcggtaatt
acggttggccctactttacgtcttcaccaatgtggtcttccgaagaaaatggctcttgaa
ttattcaaaccattcattttcgcgaaactacaagcatctggccaagcaacaaccattaaa
gctgcgaagaaaatggttgagcgtgagactccagaggtttgggacgttcttgcttctgta
attcgtcaacatccagtgatgttgaaccgtgcaccaacacttcaccgtttaggtcttcaa
gcatttgaacctattcttattgaaggtaaggcaatccgtcttcacccgctcgtatgtgct
gcgtttaacgccgacttcgatggtgaccaaatggcggtacacgttccattgacattagaa
gcacaacttgaagctcgtgcattgatgatgtctaccaacaacatcttgtcacctgcaaac
ggtgagccaatcatcgttccttctcaggacgtggtcttgggtctttactacatcacacgt
gatgcggtaaatgccaaaggtgaaggtatggtgtttgcagatacgcatgaagtgaaccgt
gctttggcaacagggcaagttaatttgcatgcgcgtgtaaaagtacgtgtacaccaaact
gtgatcaatgaaaatggtgaacgtgaacaacaaacgattattgttgatacaacaccaggt
cgttgcttactttgggaagtcgttcctcagggtttaagctttgacatgatcaatcttgag
atgactaagaaaaacatctcgaagttaatcaactcttgctaccgtaagcttggtttgaaa
gataccgtaatcttcgctgaccaattgatgtatttgggcttccgtcaagcgacgcgttca
ggtgtatctgttggtatggaagacatgcttatcccaccaacgaaacaggtgattatcgat
aaggcggaaactgaagttcgtgaaattgaacaacagtttgagcaaggtttcgtaacagct
ggtgaacgttataacaaagtggtcgatatttgggcacgtactaacgatcaagttgcgaaa
gcgatgatggataacttgtcttatacacttgtgaaaaacaagcaaggtgaagacgagaag
caaaagtcattcaactcaatttatatgatgtctgactcgggtgcccgtggtagtgcagcg
cagatccgtcagcttgctggtatgcgtggtttgatggcgaagccagatggttcgatcatt
gagaccccaattaaagcaaacttccgtgaaggtttgacagtacttcagtacttcatctcg
acacacggtgcgcgtaaaggtttggccgatactgcattgaaaactgcgaactctggttat
ttaacgcgtcgtcttgtagacgttgcacaagatttagtaattactgagcctgactgtggt
acagcgggtggcttagtgatgactccattcattcaaggtggtgatgtcatcgagccatta
cgtgatcgtgtattaggtcgtgtaactgctgaagatgtacgtcgtgcatctgatgatgaa
gtggtattacctcgtggtacgttgattgacgagaaaattgctgctcagcttgaagaagcg
ggtgttgatgaagttaaagtacgttcagtgattgcgtgtgaatctacatttggtgtatgt
gcgaaatgttatggtcgtgaccttgcacgtggccacttggtgaacccaggtgagtctgtc
ggtgttatggctgcacagtcaattggtgagccaggtacacagttaacgatgcgtaccttc
cacgtcggtggtgctgcgagccgaacttcggctgcaaacagcgttcaagtccgtaataaa
ggtactgtacgtttccataacgtgaaaactgtacaacatgccaaaggccatttggtgtca
gtttctcgttcaggtgaaattggtattgccgatgacttaggtcgtgagcgtgagcgttat
aaacttccttacggtgcaagcatcttaattaaagatggtgagactgtagaagcgggtggt
atcgtggcgacttgggatccacatacgcatccactcgttacggaagttgcaggtaaagca
cgtttcagccagattgctgatggtgtaacggcgacatcgaaaactgatgatgcaacaggt
atgacaactgttgaaatcttgcctgtaacagcacgtcctgcttctggtaaagatttacgt
cctgcaatcgtgttggatacaaccgatggcggcgaacagttctacttcttgccacaaaac
acaattgtgaccgttcgtgatggtgaaacaattggtgtgggtgatgtcattggtcgtgta
ccacaagaatcttcacgtactcgtgatattaccggtggtcttccacgtgtagctgacttg
tttgaagctcgtaagcctaaagaacatgcgatcttggcagaagtgtctggtatcgtaagc
ttcggtaaagagactaaaggtaagaaccgtttagtgattactcctgatgacggttcagag
atctacgaagaattgattccaaaatggcgtcaaatcaacgtattcgaaggcgagcatgtg
aaccgtggtgaaaccatttctgatggtccacaaaacccacatgacatcttgcgtttgaaa
ggcgaagtagcattaaccaactacatcgtgaacgaagttcaagacgtttaccgtctccaa
ggtgtaaaaatcaacgataagcacattgaagttgttgtacgtcaaatgttgcgtaaagtt
gatatcactgatggtggtgatacaagcttcatcaaaggtgagcaagtggattacatccgt
gttgttcaagagaaccaagctgtattggctcagaacaagttccctgcgaagtttgagcgt
caattgatgggtattaccaaagcatcgctttctactgactcgttcatctctgctgcatcg
ttccaggaaaccacacgtgtgttaactgaagcggctgtaacaggtaaagaagatgactta
cgtggtctgaaagaaaacgttgttgtgggtcgtttgatcccagcgggtacaggtcttgcg
tatcacttagagcgtcgtcgtcaagaagcggaagctgctgaatttgaacttcacaatgac
tttagtgaagttgaccaagcatttagtcaagcattgaattcagaccagttctaa
DBGET
integrated database retrieval system
