Acinetobacter suaedae: F2A31_14215
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Entry
F2A31_14215 CDS
T10231
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
asue Acinetobacter suaedae
Pathway
asue03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
asue00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F2A31_14215 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asue03021
]
F2A31_14215 (rpoB)
03400 DNA repair and recombination proteins [BR:
asue03400
]
F2A31_14215 (rpoB)
Enzymes [BR:
asue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
F2A31_14215 (rpoB)
Transcription machinery [BR:
asue03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
F2A31_14215 (rpoB)
DNA repair and recombination proteins [BR:
asue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
F2A31_14215 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
QER40792
UniProt:
A0A5P1UXA9
LinkDB
All DBs
Position
complement(3057802..3061890)
Genome browser
AA seq
1362 aa
AA seq
DB search
MAYSYTEKKRIRKNFGKLPQVMDAPYLLSIQVDSYRTFLQGGKTPKNREDIGLQAAFRSV
FPIESYSGNAALEFVEYSLGKPEFDVRECILRGSTYAAPMRVKIRLIIKDRETKSIKDVR
EQEVYMGEMPLMTDNGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYSARIIP
YRGSWLDFEFDAKDLVFVRIDRRRKLLATVILRALNYTNEQILNLFYEKVPVYLDMGSYQ
IDLVPDRLRGEMAQFDILDNDGKTIVEQGKRINARHVRQMEAANLAKLSVPDEYLYERIT
AEDITLKDGDVIAANTVLSHEIMVKIAEGGVKQFNILFTNDIDRGPFVADTLRADTTTGR
EEALVEIYKVMRPGEPPTKEAAENLFNNLFFSSERYDLSPVGRMKFNRRLGRPYEVGTDQ
KSREVEGILSHDDIIDVLRTLVEIRNGKGEVDDIDHLGNRRVRSVGEMTENQFRVGLVRV
ERAVKERLSQAETDNLSPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVS
ALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIGLINSLSVYAKANDFGFLETPY
RRVVDGRVTDEVEYLSAIEEVGTVIAQADSAVDKDGNLTEEMVSVRHQGEFVRMSPERVT
HMDVSAQQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMEANVARD
SGVCVIAGRGGVIEYVDASRIVIRVNEDEMIAGEAGVDIYNLIKYTRSNQNTCINQNVIV
NLGDKVARGDILADGPSTDMGELALGQNMRVAFMTWNGYNYEDSILLSERVLQEDRLTSI
HIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVTAGDILVGKVTPKG
ETQLTPEEKLLRAIFGEKAADVKDSSLRVPSGTKGTVIDVQVFTRDGLEKDERAQAIEKA
QLDAYRKDLKEEYKIFEEAARERIVRLLKGQESNGGGTTKRGDKLSEDVLSGLELVDLLE
IQPADEAIAERLTQIQVFLKEKSIEIDEKFAEKKRKLSTGDELTTGVLKVVKVYLAVKRR
IQPGDKMAGRHGNKGVVSNILPVEDMPHDIHGVPVDIVLNPLGVPSRMNVGQILETHLGM
AAKGLGEQIDKMLQQQRTIAELRAFLDKIYNKVGGEQEDLDSLTDEEVLKLAGNLRAGVP
LATPVFDGAEESQIKELLELAELPRTGQTVLFDGRTGEQFDRPVTVGYMYMLKLNHLVDD
KMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVEGR
TRIYKNIVDGNHYMDPGMPESFNVLTKEIRSLGINIELKNGD
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggcatactcatataccgaaaagaaacggatccgtaagaattttggtaaattgccccaa
gtaatggatgcaccgtacttgctttcgattcaggtcgattcgtaccgtacattcttgcaa
ggcggtaaaactccaaaaaatcgcgaagatatcggtctccaagccgcatttcgttcagtt
tttcctattgaaagttattctggcaatgctgctttagaatttgttgagtatagccttggt
aaaccagagtttgacgtacgtgaatgtattttacgtggttcgacttatgcggcaccaatg
cgcgtaaaaattcgtttgatcattaaagatcgtgaaacgaaatcaattaaagacgttcgt
gaacaagaagtctacatgggtgaaatgccgctcatgactgataatggtacctttgttatt
aatggtaccgagcgtgtaatcgtatcccaattacaccgttcaccaggcgtattctttgat
cacgataagggtaaaacccactcaagtggtaaagtgttgtattcagcacgtattattcct
taccgtggttcatggttagactttgagtttgatgctaaagacttagtctttgtacgtatt
gaccgtcgtcgtaaattattggcgaccgtgattctacgtgctttgaattataccaatgag
caaattttgaatttgttctacgaaaaagtacctgtatatcttgatatgggtagctatcaa
attgacctcgttccagatcgtttacgtggcgaaatggcgcaatttgatatcttggacaat
gatggtaaaaccattgttgaacagggtaaacgtattaatgcacgtcacgtacgtcaaatg
gaagcagcgaacttagctaagctttcagtgcctgatgaatatttgtacgagcgtattaca
gctgaagatattacgctgaaagatggcgatgtcattgctgcaaatacagtattgagccat
gaaatcatggtgaaaatcgctgaaggcggcgtgaaacagtttaatattctgtttacaaat
gatattgatcgtggtccttttgttgcagatacattgcgtgcagatacaacaacaggtcgt
gaagaagcacttgttgaaatctataaagtgatgcgtccaggtgagccgccgacaaaagaa
gcggctgaaaacctatttaataacttattcttctcttctgagcgttatgacctgtctcca
gtgggtcgtatgaagttcaaccgtcgtttgggtcgtccttacgaagtgggtactgatcag
aagtcacgtgaagttgaaggtatcttatcgcacgacgatatcattgatgtactgcgtaca
ttggttgaaatccgtaacggtaaaggtgaagtcgatgatatcgatcacttgggtaaccgt
cgtgtgcgttctgttggtgaaatgactgaaaaccaattccgtgttggtttggtacgtgtt
gaacgtgcagttaaagagcgtttaagccaagcagaaacagataacttgtctccacaagat
ctaatcaacgcaaaacctgttgctgcagcaatcaaagaattctttggttcaagccagtta
tctcagttcatggaccaaaacaacccattgtctgagattacacacaaacgtcgtgtatct
gcgcttggtcctggtggtttgacacgtgagcgtgcaggctttgaggtacgtgacgtacat
caaactcactatggtcgtgtttgtccaattgaaacacctgaaggtccaaacattggtttg
atcaactcgctttctgtatatgcaaaagcgaacgatttcggtttcttggaaaccccatat
cgtagagttgtcgatggtcgtgtaactgatgaggttgaatacttatctgcaattgaggaa
gtgggtactgttattgcacaggctgactcagcagtagataaagatggcaacctgaccgaa
gaaatggtttctgtgcgtcaccaaggtgaattcgtacgtatgtcgcctgaacgcgtaacc
catatggacgtttcagcacagcaggttgtttctgttgcagcatcattgattccattcctt
gaacacgatgatgcgaaccgtgcattgatgggttcaaacatgcaacgtcaggctgttcct
acactacgtgctgacaagccgcttgttggtacaggtatggaagcaaacgtagcacgcgac
tcaggtgtctgtgtgatcgccggtcgtggtggtgtgattgaatatgtggatgcatctcgt
atcgttattcgtgtaaacgaagatgaaatgattgcgggtgaagcaggtgtagatatttat
aacctgatcaaatacacacgttctaaccaaaatacatgtattaaccaaaatgttattgtg
aacttgggcgacaaagttgctcgcggtgacatcttggcagacggtccatcaacagacatg
ggtgaacttgcgcttggtcaaaacatgcgtgtagcgttcatgacatggaatggttacaac
tacgaagactcgatcttattatctgagcgtgtacttcaagaagaccgtttaacatcgatt
catatccaagaattgtcatgtgtagcacgtgatactaagttaggtgcagaagaaatcact
gctgatattcctaacgtaggtgaagctgcgctttctaaacttgatgaatcaggtattgtt
tatatcggtgctgaagttactgctggtgacatcctagttggtaaagtaacgcctaaaggt
gaaactcagttaacgcctgaagagaagttgcttcgtgcaatcttcggtgaaaaagcggct
gacgttaaagactcttctttacgtgttccatctggtactaaaggtacagtgatcgacgtt
caagttttcactcgtgatggcttggaaaaagatgaacgtgctcaagcaattgagaaagct
cagcttgatgcatatcgtaaagacttaaaagaagaatataaaatcttcgaagaagcagca
cgtgaacgtattgttcgcttgttgaaaggtcaagagtcaaatggtggcggtacaaccaag
cgtggcgataaactctcagaagatgtattgtctggtttagagcttgttgatttacttgaa
atccaaccagctgatgaagcgattgctgaacgtttaacgcaaattcaagtgttcttgaaa
gagaagagcatcgaaatcgatgagaaatttgcagagaagaagcgtaagctttctacaggt
gatgagttaacaacgggtgtattaaaagttgttaaggtttaccttgcggttaagcgtcgt
attcagcctggtgataagatggcgggtcgtcacggtaacaagggtgtggtatcaaacatc
ttacctgtagaagacatgccgcatgatattcacggtgtgccagttgatatcgtattgaac
ccattgggtgtaccatcacgtatgaacgtgggtcagattcttgaaactcacttgggtatg
gcggcgaaaggtctgggtgagcaaattgataagatgctccaacagcaacgtactattgct
gaattgcgtgcgttcctcgacaagatctacaacaaagttggtggcgaacaagaagatctt
gatagcttaaccgatgaagaagttttaaaacttgcaggtaacctgcgtgcaggtgtgcct
ttggcaacaccagtatttgatggtgctgaagaaagtcaaattaaagagttacttgagctt
gctgaattgccacgtactggtcaaaccgtattgtttgatggtcgtactggtgaacagttt
gaccgtcctgtaactgtaggttacatgtacatgctcaaattgaaccatttggttgatgac
aagatgcatgcgcgttcaacaggttcttactcgcttgtgacacaacaaccgcttggtggt
aaagcacaattcggtggtcagcgtttcggtgagatggaagtatgggcacttgaagcatac
ggtgcagcatatacccttcaagaaatgcttactgtgaagtcggatgacgtcgaaggtcgt
acacgcatctataagaatattgtagatggtaaccattatatggatccgggtatgcctgaa
tcgttcaacgtattgaccaaagagatccgttctttaggtatcaacattgaactgaaaaat
ggtgactaa
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