Arthrobacter sulfonylureivorans: MNQ99_05135
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Entry
MNQ99_05135 CDS
T08235
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
asuf
Arthrobacter sulfonylureivorans
Pathway
asuf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
asuf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MNQ99_05135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asuf03021
]
MNQ99_05135
03400 DNA repair and recombination proteins [BR:
asuf03400
]
MNQ99_05135
Enzymes [BR:
asuf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MNQ99_05135
Transcription machinery [BR:
asuf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MNQ99_05135
DNA repair and recombination proteins [BR:
asuf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MNQ99_05135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
UNK46740
LinkDB
All DBs
Position
1057902..1061792
Genome browser
AA seq
1296 aa
AA seq
DB search
MSSESSFGLMRIGLATADDIRDWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPSRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDEARRHEELPNLQAEHDLEKKQLGDTRDSDIAAIAKDLEDE
LARLEGEGAKAAEKKKARDSADRQMANVRKRADAEIERLDMVWDRFKNLKVADLEGDEGL
YRELRDRYGLYFEGAMGAEAIKNRLENFDMPAEAESLRDIIKNGKGQRKTRALKRLKVVN
AFLTTTNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERFR
PQVWDVLEEIITEHPVLLNRAPTLHRLGIQAFEPQLVEGKALQLHPLVCAAFNADFDGDQ
MAVHLPLSPEAQAEARILMLSSNNILKPSDGRPVTLPSQDMIIGLHHLTTKREGAEGEGR
VFASPAEAIMAHDAGELHLNSVVKIRVPGFVPSADQPAPEGWEEGQEALIETTLGQVVFN
NTLPDDYPWVEKVADKGQLSAIVNDLAERYPKVVTAATLDNLKDAGFYWATRSGVTVAIS
DIAAPAEKAAIMEGYETQAARVESQYSKGLIADDERRQELIDIWNKATNEVADAMRKNLT
KENTINRMVSSGARGNWLQVRQIAGIRGLVANPKGEIIPRPIKSSYREGLSVLEYFIATH
GARKGLADTALRTANSGYLTRRLVDVSQDVIVRELDCGTERGLTTVIAEPDHNGELRRHE
EVENSAYARTLATDVVNSEGTVVAAAGSDVGDVLIQELIDAGITEIKVRSVLTCESAVGT
CAFCYGRSLATGKTVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASAEDITQGLPRIQ
ELFEARTPKGVAPMAEVAGRVSIEDGERQMRVIVTPDDGSEEIAYPVLRRARLLVEDGQH
VEVGQQLVTGAKDPKQVLRILGPRQAQKFLVDEVQSVYRSQGVGIHDKHVEVIVRQMLRR
ITVIESGETDLLPGELAERSRFQAENRKAVSEGKQPANGRDELMGITKASLATESWLSAA
SFQETTRVLTQAAMEGKSDPLLGLKENVIIGKLIPAGTGLDRYTQVSVEPTEEAKANLFT
GPSAFGDFDYAGGDGSMTPEFHAIPLDDYDLGNDYR
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgaatcctccttcggcctcatgcgcatcggccttgccaccgcggacgacatc
cgcgactggagctacggcgaggtcaagaagccggaaactatcaactaccgcaccctgaag
cctgagaaggacggcctcttctgcgagaagatcttcggcccgtcccgcgactgggaatgc
tactgcggtaagtacaagcgcgtgcgcttcaagggcatcatctgtgagcgctgtggcgtc
gaggtcacccgggccaaggtccgccgcgagcggatgggccacatcgagctggctgccccg
gtcacgcacatctggtacttcaagggtgtcccgtcccgcctgggctacctgctcgacctg
gcgccgaaggacctggaaaaggtcatctacttcgccgcctacatgatcaccagcgtggac
gaggcgcgccgccacgaggaactgccgaacctgcaggccgaacacgatctggagaagaag
cagctgggcgatacccgcgattcggacatcgcggccatcgccaaggacctcgaggacgaa
ctggcccgcctggaaggcgaaggcgccaaggccgccgagaagaagaaggcccgcgactcc
gccgaccgccagatggccaacgtgcgcaagcgcgccgacgccgagatcgagcgcctcgac
atggtgtgggaccgcttcaagaacctgaaggtcgccgaccttgaaggcgacgagggcctg
taccgcgagctgcgcgaccgctacggcctgtacttcgaaggcgccatgggtgccgaggcg
atcaagaaccgtcttgagaacttcgacatgcctgccgaggccgagtccctgcgcgacatc
atcaagaacggcaagggccagcgcaagacccgcgccctgaagcggctcaaggtggtcaac
gctttcctgaccaccaccaactcgccgctgggcatggtgctggacgccgttccggtgatc
ccgccggagcttcgcccgatggtgcagctggacggtggccgctttgcgacctccgacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctgaagcgcctgttggatctg
ggcgcgccggaaatcatcgtcaacaacgaaaagcgcatgctgcaggaagctgtggactcg
ctgttcgacaacggccgccgcggtcgtccggtcaccgggccgggcaaccgtccgctgaag
tcgctctccgacatgctcaagggcaagcagggccgcttccgccagaacctgctgggtaag
cgcgttgactactccggccgttccgtgatcgtggtcggtccgcagctgaagctgcaccag
tgtggtcttcccaagcagatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gttgacctcaaccacgcgcagaacatcaagagcgccaagcgcatggtcgagcgtttccgc
ccgcaggtctgggacgtgctggaagagatcatcaccgaacacccggtgctgctcaaccgt
gcaccaaccctgcaccgcctgggcatccaggcgttcgagccgcagctggtggaaggcaag
gcgctgcagctgcacccgctggtctgtgcagccttcaacgccgacttcgacggcgaccag
atggctgtgcacctgccgctgagccccgaggcgcaggccgaggcgcgcatcctgatgctc
tcctcgaacaacatcctgaagccgtcggacggccgtccggtgaccctgccttcacaggac
atgatcatcggtctgcaccacctgaccaccaagcgcgaaggcgcagaaggcgaaggccgt
gtcttcgccagcccggccgaagccatcatggcccacgacgccggcgagctgcacctgaac
tccgtggtcaagatccgcgtgcccggcttcgtgccgagcgccgaccagcccgcaccggaa
ggttgggaagagggccaggaagcgctgatcgaaaccacgctcggccaggtcgtcttcaac
aacaccctgcccgacgattacccctgggttgagaaggtggcggacaagggccagctctcg
gcgatcgtgaacgatctggccgagcgctacccgaaggtcgtcactgcggcaacgctggac
aacctcaaggacgccggtttctactgggccacccgctccggtgtcaccgtggcgatctcc
gacatcgccgccccggccgagaaggccgccatcatggagggctacgaaacccaggcggca
cgcgtcgagtcccagtacagcaagggcctgattgccgacgacgaacggcgccaggaactg
atcgacatctggaacaaggcaaccaacgaggttgccgacgcgatgcggaagaacctgacc
aaggaaaacaccatcaaccgcatggtgtcctccggcgcccgtggtaactggctgcaggtc
cgccagatcgccggtatccgtggtctggtggccaacccgaagggcgagatcatcccgcgc
ccgatcaagtcctcctaccgtgagggcctgtcggtgctggagtacttcatcgccacgcac
ggtgcccgtaagggcctggccgataccgcgctgcgtaccgccaactcgggttacctgacc
cgtcgtctggtggacgtctcgcaagacgtgattgtccgcgaactggattgcggcaccgag
cgcggcctgaccacggtcatcgccgaaccggaccacaacggtgaactgcgccggcacgaa
gaggtggagaactccgcctacgcccgcacgctggccaccgatgtggtgaactccgagggc
accgtggtggccgcggcaggctccgacgtcggcgatgtgctgatccaggaactgatcgac
gccggcatcaccgagatcaaggtgcgctccgtgctcacctgtgagtccgccgtcggtacc
tgtgcgttctgctacggccgttcgctggccaccggcaagaccgtggacatcggcgaggca
gtcggcatcatcgccgcacagtccatcggtgagcccggcacgcagctgaccatgcgtacc
ttccacaccggtggtgttgcctccgcggaagacatcacccagggcctgccccgtatccag
gagctcttcgaagcccgtacgcccaagggcgtcgcgccgatggccgaagtggccggacgc
gtgtccatcgaggacggcgagcgccagatgcgcgtcatcgtcacccccgatgacggctcg
gaagagatcgcctacccggtactgcgccgtgctcgactgctggtcgaagacggccagcac
gtagaggtcggccagcagctggtcaccggtgccaaggacccgaagcaggtgctgcgtatc
ctcggcccgcgccaggcccagaagttcctggtggacgaggtccagagcgtgtaccgcagc
cagggcgttggcatccacgacaagcacgtggaagtcatcgtgcggcagatgctgcgccgc
atcaccgtcatcgagtcgggcgaaaccgacttgctgccgggcgagctcgccgaacgcagc
cgcttccaggcggagaaccgcaaggcggtttccgagggcaagcagcctgccaacggccgt
gacgagctgatgggcattaccaaggcatcgctcgccaccgagtcgtggctgtcggccgcg
tccttccaggagaccacccgcgtcctgacgcaggcggccatggaaggcaagtccgacccg
ctgctcggcctgaaggagaacgtcatcatcggtaagctgatcccggccggcaccggcctg
gaccggtacacccaggtgtcggtggagccgacggaggaagccaaggccaacctcttcacc
ggccccagcgccttcggcgacttcgactacgccggcggcgacggttcgatgacgcccgag
ttccacgccatcccgctggatgactacgacctgggcaacgactaccgctaa
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integrated database retrieval system
