Arcobacter suis: ASUIS_1549
Help
Entry
ASUIS_1549 CDS
T06792
Name
(GenBank) helicase, RecD/TraA family (non-RecBCD)
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
asui
Arcobacter suis
Pathway
asui03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ASUIS_1549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asui03400
]
ASUIS_1549
Enzymes [BR:
asui01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ASUIS_1549
DNA repair and recombination proteins [BR:
asui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ASUIS_1549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
HHH_RecD2
AAA_19
UvrD_C_2
Viral_helicase1
OB_YrrC
SH3_13
HHH_5
PIF1
Ribosomal_S13
PhoH
Mg_chelatase
AAA_16
AAA
AAA_22
ABC_tran
Sigma54_activ_2
AAA_5
Motif
Other DBs
NCBI-ProteinID:
AXX90028
UniProt:
A0AAD0WQZ8
LinkDB
All DBs
Position
complement(1564069..1566387)
Genome browser
AA seq
772 aa
AA seq
DB search
MSQEEYKSFKLSGVIKKVLYKNDETKYIIAVLENNQKICGAYFDTDIEKIVGEEVILKGN
WITHKKYGVQFEFDTLQLKEAEIFFFLTKIVKGVGKKFAHELLEKYDEEELVDILSNRPQ
ELLDFKGIKEKKLQMIVSSWQKFQHLRELGSFLAKFGVTSNLITKIYSSLGEVENLIEKI
KENPYILINIKGIGFKRADEIAKSLGIDPKSEFRIMACLNYTLREYCDNNGNSSIEKFHL
YKLLDDSLRFFNEEALYESAISKMLVEEDLFVTSENRYALSMLYYAEKRILEFFTRRKDE
KNRKIIATFDEYLLKKQETLGFELSTEQKKAVELINNGDKTLFLIGYAGTGKSTSSRAIL
ELLEETMSYDDIMTIALSGIASQRISDTTGYNSSTIQSLLMKHKEKDFFPYKAILLDEAS
MVNSVTFYQIISKIADDTIFIIVGDDGQLPAIGAGNVLADAIKYELAPICKLTKIYRQNE
NQAIAVIANDIRKGEVPAYKEEYEDFKFIDVSISNYYSQKNSVSSNDFADLRGENSEYIL
NNILNISASYIEQYYDFIKKKKISKALTLFQVITPMKAGILGVDNLNIQLQKLFNHTKGK
AFVSKVYEYKLTDKVIHIKNENMKAQTMSMYKSGSTDFLERRVYNGQLGLIIKLDFEEEK
CIVLYPNDDMVVFYDFENVYTLLSLAYCLTIHKTQGMEYENALIPMSFSHYIMHNTKLLY
TAITRAKRMCYIVGEEEAFKSACKKLEITIRESVINDLLSKKIIQNREIIVV
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagaagagtataaaagctttaagttatcaggagttataaaaaaagttttatac
aaaaatgatgaaacaaaatacataatcgcagttttagaaaataatcaaaaaatttgtggt
gcatatttcgatacagatattgaaaaaatcgttggtgaagaggttattttaaaaggaaat
tggataactcataaaaaatatggagttcaatttgaatttgatactttacagctaaaagag
gctgaaattttcttttttcttacaaaaatagtaaaaggtgttggtaaaaaatttgcccat
gaattactagaaaaatatgatgaagaagagttagtagatatattaagcaatagacctcaa
gaacttcttgattttaaaggaataaaagagaaaaagcttcaaatgatagttagctcttgg
caaaaattccaacacttaagagaactaggttcttttttagcaaaatttggggtaacttca
aatcttattacaaaaatatattcaagtttaggtgaagttgaaaacctaatagagaaaatc
aaagaaaatccatatattttaataaacataaaaggaattggttttaaaagagccgatgaa
atagctaaatcacttggaattgacccaaaatctgagtttagaataatggcatgtctaaac
tacactttaagggaatattgtgataataatggaaactcttcaatagaaaaatttcattta
tacaaacttttagatgatagtttacgtttttttaatgaagaggctttatacgaatcagct
atttctaaaatgctagttgaagaagatctttttgtgacaagcgaaaatagatatgcctta
tcaatgctttattatgcagaaaagcgaattttagagttttttacaagaagaaaagatgaa
aaaaacagaaaaattattgccacttttgatgaatatttactgaaaaaacaagagacttta
ggttttgaattaagtactgagcaaaaaaaagcggttgaactaataaacaacggtgataaa
actctatttttaataggttatgcaggaactggaaaatcaacttcaagtagggcgatttta
gagcttcttgaagagacaatgtcttatgatgatattatgactattgctttaagtggaatt
gcttcacagcgtatttcagacaccacaggttacaactcttcaacgattcaatcactttta
atgaaacataaagagaaagattttttcccgtataaagctattttacttgatgaagcttca
atggtaaattctgttactttttatcaaataatttcaaaaattgctgatgatactattttt
ataattgtgggagatgatggacaattacctgcaattggggctgggaatgtacttgcagat
gccataaaatatgaacttgctcccatttgtaaactaacaaaaatctatagacaaaatgaa
aatcaagcaattgctgttattgcaaacgatataagaaaaggagaagttcctgcttataaa
gaagaatatgaggattttaaatttattgatgtatctatttcaaattattattcacaaaaa
aactccgtttcatcgaatgattttgcagatttaaggggtgaaaattctgagtatattttg
aataatattttaaatatttcagcttcttatatagagcaatattatgattttataaagaaa
aaaaagatttcaaaagcattaacactttttcaagtgatcactcccatgaaagctggaatt
ttaggggttgataatctaaatattcaacttcaaaaactctttaatcatacgaaaggaaag
gcttttgtttcaaaagtgtatgaatataaattaactgacaaagtaattcatataaaaaat
gagaatatgaaagctcaaactatgagtatgtataaaagtggctcaactgattttcttgaa
agaagagtttacaacggtcaattaggccttataataaaacttgattttgaagaagaaaaa
tgtatagttttgtatccaaatgatgatatggttgtattttatgattttgaaaatgtttat
actttattatcactagcatattgtctaactattcataaaacccaaggaatggagtatgaa
aatgctctaattcctatgagtttttcccattacataatgcacaatacgaaacttttatac
actgcaatcacaagagcaaaaagaatgtgttatatcgttggtgaagaagaagcatttaag
agtgcttgtaaaaaattagaaataacaataagagaatcagtaataaatgatttactaagt
aaaaaaataattcaaaatagagaaataatagtcgtttaa
DBGET
integrated database retrieval system
