Arcobacter suis: ASUIS_2349
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Entry
ASUIS_2349 CDS
T06792
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
asui
Arcobacter suis
Pathway
asui03420
Nucleotide excision repair
asui03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ASUIS_2349
03430 Mismatch repair
ASUIS_2349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asui03400
]
ASUIS_2349
Enzymes [BR:
asui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ASUIS_2349
DNA repair and recombination proteins [BR:
asui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ASUIS_2349
MMR (mismatch excision repair)
Other MMR factors
ASUIS_2349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
PcrA_UvrD_tudor
UvrD_C_2
AAA_11
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
AXX90767
UniProt:
A0AAD0T2F7
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All DBs
Position
complement(2349729..2351783)
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AA seq
684 aa
AA seq
DB search
MSENLLSSLNESQKIAAQHIDGPMLILAGAGSGKTKTITTRLAYLISIGIDPRSILTLTF
TNKAASEMRERAFNMLDSSMINTPPLLCTFHKFGLLFLKFHMSELNRKNNFIIIDTDDKK
RIIKSIDKEITTSLLVSEISRYKNSLLTPSEAKSAAQLKLYQQIAEIYEKYEAYLEKNNL
VDFDDLLLLPYKILKNNQKLADEISQKYQYIMVDEYQDTNELQYRLLRLLCSSHNNICVV
GDDDQSIYGWRGATIKNILNFSEHFENTLVVKLEENYRSTDTILNHANQLIEHNRDRLGK
KLIGTRQKGDSIRIYESQDENEETRKIIEDIKQLIDSGTNAKNIAILFRVNALSRSLEEG
FNKAGLNYKLVGGMKFYERSEIKDLIAYFRILTNSNDNFSIKRIINKPKRGIGKTTIDKL
EAKSIESGRSIFDLIQQLESDEISSIVGKKNARTLKVFEASILDLKELLNESKMKFFDSF
EETFDYRASYDNLPDGYERQANIDEFYGYIRDYFIQNPHLDLKDFLNEIALESENDDYHG
EAVSMMSIHASKGLEFKKLFIIGLEEGFFPIIGDGSDLEEERRLGYVAITRAMDNLTLSF
VHSRFYKGKRATLIKSRFLSECGLIKGSLTIEKQSGFKKGDLVEHKIFGMGRVVKSTNAG
KDYKLTINFGGTHRDILSSFVQKA
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaatttattatcatcactaaatgaatcgcagaaaattgctgcacaacacata
gatggccccatgcttatacttgctggtgcaggctctggtaaaacaaaaactataactact
aggctcgcatatttaatatcaataggtattgatccaagatcaatattaacacttactttc
acaaataaagcagctagtgaaatgagagaaagagctttcaatatgcttgattcttcgatg
ataaacactccaccactattgtgtacttttcataaatttggacttttatttctaaaattc
catatgagtgaactaaatagaaaaaacaattttataataatagatactgatgataaaaaa
agaattataaaatcaattgataaagagattactacatctttattggtttcagagatttca
agatataaaaattcattattaactccaagtgaagcgaaaagtgcagctcaattaaaactt
tatcaacaaattgcagaaatatatgagaaatatgaagcttatttagaaaaaaataatctt
gtagattttgatgatttattattgcttccttataaaatattaaaaaacaatcaaaaacta
gcagatgaaattagtcaaaaatatcaatatataatggttgatgagtaccaagatacaaat
gaacttcaatatagacttttaagattattatgttcaagccataataatatttgtgttgtt
ggtgatgatgaccaatctatttatggatggcgtggtgcaacaattaaaaatattttgaat
ttttctgaacattttgaaaatactttggttgttaaacttgaagaaaattatagatctaca
gataccattttaaatcatgcaaatcaattaatagaacataaccgagatagacttggtaag
aaattaataggaactagacaaaagggcgattcaataagaatttatgaatctcaagatgaa
aatgaagaaacaagaaaaataattgaagatataaaacaattaattgatagtggaacaaat
gcaaaaaatatagcaatattatttagagtaaatgccttatcaagatcacttgaagaggga
tttaataaagctggactaaattataaattagttggtggaatgaaattctacgaaagaagt
gaaataaaagatttaattgcgtattttagaattttgacaaactcaaatgataacttttct
attaaaagaattattaataaaccaaagcgtggaattggtaaaacaacaatcgataaatta
gaagctaaatctattgaaagtggaagatcaatttttgatttgattcaacaattagagtct
gatgaaataagttcaattgtaggtaaaaaaaatgcaagaacactaaaagtttttgaagct
tcaattttagatttaaaagagttattaaatgaatcaaaaatgaaattttttgatagtttt
gaagagacttttgattatagagcttcatatgacaatcttcctgatggatatgagcgacaa
gcaaatattgacgaattttatggatatattagagattattttattcaaaatcctcactta
gatttaaaagattttttaaatgagattgcacttgaaagtgaaaatgatgattatcatgga
gaagctgtttctatgatgagtattcatgcttcaaaaggtttagaatttaaaaaacttttt
attataggtcttgaagaaggttttttcccaattattggtgatggaagtgatttagaagag
gaaagaagattgggttatgtagcaattacaagagctatggataatttaactttatctttt
gttcattctcgattttataagggaaaaagagcaactcttattaaaagtaggtttttaagt
gaatgtggtttgataaaaggaagtttaactattgaaaaacaatcaggctttaaaaaaggt
gatttagttgagcataaaatctttggaatgggaagagtagtgaaatctacaaatgccgga
aaagattataaattaacaataaattttggcggaacacatagagatatattatcttcattt
gttcaaaaagcataa
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