Arcobacter suis: ASUIS_2523
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Entry
ASUIS_2523 CDS
T06792
Symbol
recJ
Name
(GenBank) single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
asui
Arcobacter suis
Pathway
asui03410
Base excision repair
asui03430
Mismatch repair
asui03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ASUIS_2523 (recJ)
03430 Mismatch repair
ASUIS_2523 (recJ)
03440 Homologous recombination
ASUIS_2523 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asui03400
]
ASUIS_2523 (recJ)
DNA repair and recombination proteins [BR:
asui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ASUIS_2523 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ASUIS_2523 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ASUIS_2523 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF1192
CobU
CheZ
Motif
Other DBs
NCBI-ProteinID:
AXX90937
UniProt:
A0AAD0STH6
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All DBs
Position
2528692..2530257
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AA seq
521 aa
AA seq
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MSKITKSRLFELLSARHLNNPYSKLADLPSPEKFKDIDIACKRIKKAILEKETITIVGDY
DVDGVISTTIMLDFFNTIGVKVNHIIPNRFEHGYGLSTKIVDLINEGLVITVDNGISAYD
ASVKLKEKNIDLIITDHHTVGAKIPIALAIVNPKQHDCNFEFKDICGAQVAWYLCAAIKK
EMNLDVNMSNFLDLLCVAIIADIMPMTALNYTIVKQGLKKIKTSSREAFKKLNEIMSKEI
FVSDDVGFFIAPKLNSAGRMDDASVALSFLLSKSSNAANESLSLLDELNNYRKTLQEEIS
KKAEAKTDKKDNAVIVWGENWHEGVIGIVASKLSNSHKKPAFIFSIHNGIAKGSARANAN
INLYDIITKAAHLLLGYGGHKNAAGLSLKAENLEEFKSIINKELENSKEDLHIEPITLGE
LDVSSVDLEFLSIIENFEPYGLENHRPIFKISNTTLVKYDLIGRDKNHLKLTLNSDGVIF
EALKFNDSNINIASNLDLIVSVSKNEFRGEITPQFLIQDIL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaatcacaaaaagtagactttttgaactactatctgcaagacacttgaataat
ccttattcaaagcttgcagaccttccctctcctgaaaaattcaaagatatagatattgct
tgtaaaagaatcaaaaaagctattttagaaaaagaaaccattactattgttggtgattac
gatgttgatggagttatttcaactacaattatgcttgatttttttaatacaattggagtt
aaagtaaatcatattattccaaataggtttgaacatggatatggtttatctactaaaatt
gttgatttaattaatgaaggtttagtaatcactgttgataatggaatttctgcatatgat
gcttctgttaaattaaaagaaaaaaatattgatttaataatcactgatcatcatacagtt
ggagctaaaattccaattgcacttgcaatagtaaatcctaagcagcatgattgtaacttt
gaattcaaagatatttgtggcgctcaagttgcttggtatttatgtgcagccattaaaaaa
gagatgaatttagatgtaaatatgtcaaacttccttgatttactttgtgttgctataatt
gctgatattatgcctatgaccgcgctcaattacaccattgtaaaacaaggtcttaaaaaa
ataaaaacctcatcaagggaagctttcaagaaactaaatgaaattatgtcaaaagagatt
tttgtatctgatgatgtgggattttttattgctccaaaactaaatagtgcaggaagaatg
gatgatgctagtgttgccttatcatttttactttcaaagagctcaaatgctgcaaatgaa
tcattatcacttttagacgaattaaacaattatagaaaaactctacaagaagagatttca
aaaaaagcagaagcaaaaactgataaaaaagataatgcagttattgtttggggtgagaat
tggcatgagggagtaattggaatagttgcttcaaagttatcgaattcccacaaaaaacca
gcttttatattttcaattcataatggaattgcaaaaggaagtgcaagggcaaatgcaaat
ataaatttatatgacattattactaaagcagctcatttattactaggatatggcgggcat
aaaaatgcggcaggattatctttaaaagcagaaaacttagaagagtttaaaagtattata
aataaagaattagaaaactcaaaagaagatttgcatatagaacctattactttaggtgaa
cttgatgtatcaagtgttgatttagaatttttatcaattatagaaaattttgaaccttat
ggtttagaaaatcatagaccaatttttaaaatttcaaatacaactttagtaaaatatgat
ttaattggtcgtgataaaaatcatttaaaattaactttaaatagtgatggagttatattt
gaagctttaaaatttaatgactcaaatataaatatagcttcaaatttagatttaattgta
agtgtgagtaaaaatgagtttagaggagaaataactcctcagtttttaattcaagatatt
ttataa
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