Acidianus sulfidivorans: DFR86_06700
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Entry
DFR86_06700 CDS
T05487
Name
(GenBank) exosome complex exonuclease Rrp41
KO
K11600
exosome complex component RRP41
Organism
asul
Acidianus sulfidivorans
Pathway
asul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DFR86_06700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asul03019
]
DFR86_06700
Messenger RNA biogenesis [BR:
asul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
DFR86_06700
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
DFR86_06700
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
HET-S
Motif
Other DBs
NCBI-ProteinID:
AWR97272
UniProt:
A0A2U9IMM1
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All DBs
Position
1316034..1316768
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AA seq
244 aa
AA seq
DB search
MLQIQKPKLILDNGLRLDGRKPDELRPMKMEIGVLKNADGSSLVEVGNTKIIAAVYGPKE
MHPRHLALPNRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALEGTILVEQFPRT
LIDVFMEVIQADAGTRLASLMAASLAVVDAGIPVKDLIAAVAVGKADGVVVLDLNEPEDM
WGEADMPVAMLPSLGQINLIQLNGNMTPEEFRKGIELAKKGIEYIYNLEKETIKNKYAEF
KEES
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgttacaaattcaaaagcctaaactaattttggacaatggtttaagactagatggaaga
aaaccagacgaattaaggccaatgaaaatggaaataggagtcttaaaaaatgcagacgga
tcttctttagtagaagtgggtaatacaaagattatcgctgcagtatacggtccgaaagaa
atgcaccctagacatcttgcattgccaaatagagcagttttaagagtaagatatcatatg
acaccattctctaccgatgaaagaaaaaatcctgcaccaagtagaagagagatagaacta
tctaaagtgataagagaggctctagaaggaacgatactagttgaacaatttcctagaaca
ttaattgatgtatttatggaggtaattcaagctgatgcaggtacaagattagcatctctt
atggcagcttctttggcagtagtagatgcaggtataccagtaaaagatttgatagcagct
gttgcagttggaaaagctgacggcgtagttgttttagatttaaatgaaccagaagatatg
tggggagaagcagatatgccagtagcaatgttaccatccttagggcagattaatttaata
caattaaatggaaatatgactccagaagaatttaggaagggtattgaattagctaaaaaa
ggtatagaatatatctataatttagaaaaagaaacaatcaaaaataaatacgctgaattt
aaggaggaaagctaa
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