KEGG   Acidianus sulfidivorans: DFR86_08910
Entry
DFR86_08910       CDS       T05487                                 
Name
(GenBank) RNA-binding protein
  KO
K07573  exosome complex component CSL4
Organism
asul  Acidianus sulfidivorans
Pathway
asul03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:asul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DFR86_08910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:asul03019]
    DFR86_08910
Messenger RNA biogenesis [BR:asul03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     DFR86_08910
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     DFR86_08910
SSDB
Motif
Pfam: ECR1_N A2L_zn_ribbon Zn_ribbon_3 S1 HVO_2753_ZBP Cas12f1-like_TNB RUBY_RBDX FtrD-like EXOSC1 TerY_C DmmA-like_C Zn_Ribbon_TF Zn_Tnp_IS91 HypA DUF7130 Zn_ribbon_8 PCB_OB DUF3797 DUF5817 Auto_anti-p27
Other DBs
NCBI-ProteinID: AWR97657
UniProt: A0A2U9INU8
LinkDB
Position
1689943..1690509
AA seq 188 aa
MLPQGDLIYPGTLLAVEEEFSAGEGSYEENGNIRAAVAGKVFYDMISRRSNVLPSKKTLY
TSLKKAKYVYGIVTSIKEETANISINSIEDTFISPISGILHVTQISNKYIKNITDAIKIG
DIIKAKPITFTIPVFLTLKGKDLGVILAQCSICGHIMIKSDEEHLKCPNCGNIEQRKIGS
YMVKKIAN
NT seq 567 nt   +upstreamnt  +downstreamnt
atgctacctcaaggagatctaatctatccagggacattattagctgtagaagaagaattt
tcggcaggagaaggatcatatgaagaaaatggaaatataagagcagcagtagctggtaaa
gtattttatgatatgataagcagaagaagtaatgtacttccatcaaagaagacactttat
actagcttaaaaaaggctaaatatgtttatggtattgtaacttcaataaaagaagaaact
gcaaatataagcataaattctatagaagacacattcatttccccaatctccggtatatta
catgtaacgcaaatatcaaataaatatataaagaatataactgacgcaataaaaatagga
gatattattaaagcaaaaccgataacatttacaattccagttttccttacactaaaagga
aaagatctgggggtaattttagctcagtgttcaatttgtggacatatcatgattaaatct
gacgaagaacatttaaaatgtccaaactgtggtaatatagaacaaagaaaaataggaagc
tacatggtgaagaaaattgcaaattaa

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