Acidithiobacillus sulfuriphilus: EC580_002275
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Entry
EC580_002275 CDS
T11327
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
asuu Acidithiobacillus sulfuriphilus
Pathway
asuu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asuu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EC580_002275 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asuu03400
]
EC580_002275 (recD)
Enzymes [BR:
asuu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EC580_002275 (recD)
DNA repair and recombination proteins [BR:
asuu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EC580_002275 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
RecD_N
NAT10_TcmA_helicase
AAA_22
SH3_13
SLFN-g3_helicase
AAA_16
UvrD_C
nSTAND3
AAA_28
Motif
Other DBs
NCBI-ProteinID:
XRI77526
LinkDB
All DBs
Position
467548..469281
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AA seq
577 aa
AA seq
DB search
MSPDGTPDFPLARHFAELLGRLGATAEVQDLAAILMTRVADGHSCLTLEAALLAPEAQAS
LDGSPVLGAPGDFRPLILDGHRLYLYRFWQYETRLAAALLKRAADLPEVDEERLGAGLLR
HFPLPAGDQGMGLGDQRLAAAVAVLRRLAVISGGPGTGKTTTVLGVLALLLEQDPLRPPR
IALTAPTGKAATRLADALRAGRQRLDLPPLLAGAIPDEAQTLHRLLGYHPERGFAHDADH
PLPMDVVVVDEASMVGLALMEALLRALPAHARLILLGDRDQLASVEAGAVLAEICAAPAG
PRPAFAARLSALTGLPVGGAGEGPLADCMVHLRHSYRFAAGGSIGRLARALQQGDAGAAL
GILEAEAIWQPLPAEQGLASALVEVVRAGWKEYFRALQREVEPARIHAAWERFRLLSALR
QGPWGAEVLNAVLDARLARAPRRGGHYHGRPVIIRQNDGALGLFNGDVGLTLAGAGQLRV
FFPGREGFRAFAPERLPAHESAWVMTVHQSQGSEFDDILLLLPDADNPVLSRELLYTAVT
RARRGVRLWGAEAALRGALARRMARDSGLEARLWSSP
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgatgggacgccggattttcccttggcgcggcatttcgcggaactgctgggc
cgcttgggggcgacggcggaggtacaggacctcgccgccatcctcatgacgcgcgttgcg
gatggccatagctgcttgacgctggaggcggcgctgctcgcccccgaggcgcaggcatcc
ctggacgggagcccggtactgggggcgcccggagacttccgtcccctcattctcgacggc
caccgcctctatctgtaccgtttctggcaatatgaaacccgccttgccgcagccctgctg
aagcgcgccgcggacctgccggaggtggatgaagagcggctgggcgccggcctgctgcgc
cacttccccctgcccgccggggatcaagggatgggattgggggaccagcgtctggctgcg
gcggtggcggtgctgcgccgcctggccgtcatctccggtgggccggggaccggcaagacc
accaccgtcttgggcgttctcgccctgctgctggagcaggacccgctgcggccgccccgc
atcgccttgacggcccccaccggcaaggctgccacccgcttggcggacgccttgcgcgca
gggcggcagcgcctggatttgcccccgctgctggccggggccattcccgatgaggcgcaa
accctgcaccgcctcctgggttatcatcccgaacggggcttcgcccacgacgccgatcac
cccctgcccatggatgtcgtggtggtggacgaggcgtccatggtcgggctggccctcatg
gaggccctgctgcgggccctgccggcccatgcccggttgatcctgctgggggatcgggac
cagttggcctcggtggaagcaggagctgtgctggcggagatctgcgccgcgccggcagga
ccccgacccgcttttgcggcgcgcctcagtgccctgacggggttgccggtgggcggcgcg
ggcgagggccccttggccgactgtatggtgcatcttcgccatagctaccgttttgccgcc
ggcggtagcatcggacggctggcccgcgccctgcagcagggcgatgccggagccgccctg
ggcatcctggaggcggaggccatctggcagcccctgccggcggaacaaggcttggccagc
gcgctagtggaggtggtcagggcgggctggaaggagtatttccgggccttgcagcgggag
gtcgagcccgcccgcatccatgccgcctgggaacgctttcgcctgctcagcgccctgcgc
cagggcccctggggtgccgaagtgctcaacgccgttctggacgcgcggctggcccgggct
ccgcggcgcggggggcattatcatggtcggccggtgatcatccgtcagaacgacggcgcc
ctgggtctttttaacggcgacgttggcctcaccctggcgggcgcgggacagttgcgggtc
tttttccccggccgcgaagggttccgcgcctttgcccccgaacgcctccccgcccacgag
agcgcctgggtgatgaccgtccatcaatcccagggcagcgagtttgacgatatcctgctg
ctcctgcccgacgccgacaaccccgtcctcagccgggaactcctctataccgccgtcacc
cgcgcccgccggggagtccggctctggggtgccgaggccgccctgcggggcgccctggcg
cggcgcatggcgcgggacagcgggctggaggcgcgcctgtggagcagtccctag
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