Acidithiobacillus sulfuriphilus: EC580_005355
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Entry
EC580_005355 CDS
T11327
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
asuu Acidithiobacillus sulfuriphilus
Pathway
asuu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
asuu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EC580_005355 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asuu03400
]
EC580_005355 (uvrB)
DNA repair and recombination proteins [BR:
asuu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EC580_005355 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EC580_005355 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
AAA_22
UB2H
Kinesin
DUF87
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
XRI78105
UniProt:
A0ACD5HT69
LinkDB
All DBs
Position
1045396..1047414
Genome browser
AA seq
672 aa
AA seq
DB search
MQKRFELKSQFSPQGDQPEAIRLLTAGLLAGEAYQTLLGVTGSGKTFTMANIIAATQRPA
IVMAPNKTLAAQLYAELRSFFPGNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIE
QMRLSATKALLERPDVIIVATVSAIYGLGDPAAYHGMILHLREGDSMDQRAILHRLADMQ
YARNPVELKRGTFRVHGDVIDIWPAESEDEAVRVELFGDEIERVSLFDPLTGKILTRLPR
YTVFPKSHYVTPRATILGALEAIKDELRERLAFLRQQHKLVEAQRLEQRARFDLEMMAEL
GYCSGIENYSRYLSGRAAGEPPPTLMDYLPEGALLFIDESHVTVPQIGGMYKGDRSRKET
LVEYGFRLPSALDNRPLMFSEFESLMPQTVFISATPGPYELQRSGQVVEQVVRPTGLVDP
EVEVRPASGQVDDLVGEIHVVVATGWRVLVTTLTKRMSEDLTDYLHELGIKCRYLHSDIE
TVERVEIIRDLRAGVFDVLIGINLLREGLDMPEVALVAILDADKEGFLRSERSLVQTIGR
AARNLHGRAILYADTVTGSMERAMGETARRRQKQVAFNLAHGITPKGIVKPVADLIDGVY
RRNAPQAARAAEPVQSYGQAGDPKALGKRIKELEEAMYRHARNLEFEQAARVRDQIKGLE
RQMLGVEVLAGD
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagcgcttcgaactcaagagccaattttccccccagggtgatcagcccgaggcc
attcgtctgctgacggccggtttgctggctggtgaagcttatcagaccttgcttggcgtc
accggttccgggaagaccttcaccatggccaatatcatcgccgcaacccagcgcccggcc
atcgtcatggcccccaacaagaccctggccgcacagctctatgccgagttgcgctccttt
ttccccggcaacgccgtggagtattttgtcagttattacgattattatcagcccgaggcc
tacgtgccgtcctccgatacctttatcgagaaggacgcctccatcaatgaccatatcgag
cagatgcgcctgtcggccaccaaggccctgctggagcggcccgatgtcatcatcgtggcc
accgtctcggccatttatggactgggcgatcccgccgcctaccacggcatgatcctgcac
cttcgcgagggggacagcatggatcagcgcgccattctccatcgtctggccgatatgcag
tatgcccgcaaccccgtggagctcaaacgcggtacctttcgcgtgcatggtgatgtcatc
gacatctggccggcggagagcgaggacgaggcggtgcgggtggaactcttcggcgatgaa
atcgagcgcgtctcccttttcgatcccctgactggcaagatcctcacccgcctgccgcgc
tacacggtctttcccaagagtcattacgtcacgccgcgggcgaccattctgggtgccctg
gaggccatcaaggacgagttgcgggaacgcttggcgttcctccggcaacagcacaagctg
gtggaggcacagcgattggagcaacgcgcgcgcttcgacctggaaatgatggccgaattg
ggctattgctcgggcatcgagaattattcccgttacctttcgggtcgggccgccggcgaa
ccgccccccaccctgatggattatctgcccgaaggcgcgctgcttttcatcgacgaatcc
cacgtcacggtgccgcagatcggcggcatgtacaagggcgaccgctcgcgcaaggaaacc
ctggtggaatacggtttccgcctgccctcggccctggataaccggccgctgatgttcagc
gagttcgagtccctcatgccccagaccgttttcatttcggccaccccgggcccttacgag
ctgcaacgctccgggcaggtggtggagcaggtggtgcgacctaccggcctggtggatccg
gaagtggaggtgcggccggccagcggtcaggtggatgacctggtgggggagatccatgtg
gtggtggccaccggctggcgggtgctggtgacgacgctgaccaagcgcatgtccgaggat
ctcacggattacctgcacgaactgggcatcaaatgccgctacctgcattcggatatcgag
accgtggagcgggtggagatcatccgcgatctgcgcgccggggtctttgacgtgctcatc
ggcatcaacctgctgcgcgagggcctggatatgcccgaggtggccctggtggccatcctg
gatgccgacaaggagggttttctccgttccgagcgctccctggtgcagaccatcggccgc
gccgcccgcaatctgcatggccgggccatcctctacgccgacaccgtgaccggttccatg
gagcgggccatgggagagacggcgcggcggcgacaaaagcaggtggccttcaacctcgcc
cacggcattacccccaagggcatcgtcaagccggtggcggacctcatcgatggcgtctat
cggcgcaacgccccccaggcggcccgcgccgccgaaccggtgcagtcctatggtcaggcg
ggcgatcccaaggccctgggcaagcggatcaaggaattggaggaggccatgtatcggcat
gcgcgcaacctggagtttgaacaggccgcccgggtccgcgaccagatcaaggggctggag
cggcagatgctcggggtggaagtgttggccggcgactga
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integrated database retrieval system
