Acidithiobacillus sulfuriphilus: EC580_006935
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Entry
EC580_006935 CDS
T11327
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
asuu Acidithiobacillus sulfuriphilus
Pathway
asuu03030
DNA replication
asuu03430
Mismatch repair
asuu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asuu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EC580_006935 (dnaE)
03430 Mismatch repair
EC580_006935 (dnaE)
03440 Homologous recombination
EC580_006935 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asuu03032
]
EC580_006935 (dnaE)
03400 DNA repair and recombination proteins [BR:
asuu03400
]
EC580_006935 (dnaE)
Enzymes [BR:
asuu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EC580_006935 (dnaE)
DNA replication proteins [BR:
asuu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EC580_006935 (dnaE)
DNA repair and recombination proteins [BR:
asuu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EC580_006935 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XRI78394
UniProt:
A0ACD5HSH3
LinkDB
All DBs
Position
complement(1371715..1375200)
Genome browser
AA seq
1161 aa
AA seq
DB search
MQPGFIHLHVHSEYSLEDGIIPVKSLVKRCAASGMPAVAITDHGNLFALVKFYTAARSAG
VKPIIGSEIWITNPQDPGRPHSLVLLCMNDQGYRHLSRLLSRAYLQGLRDGRAQIERDWL
DGASDGLIALSAAGQGEVGRLLLRNPDAAAETARWYAERFPDRFYLEVQRNGEAEQEALV
TATVALAQRLDLPLVASNNAHFLDIADFAAFDARQCIAAGLTLSDSRRPRRFTPEHRLPN
PEEMLERFADLLEACQNTVEIAQRCNLELILGHYALPDYPTPQGEPIDQYFHDAAAAGLD
QRLEELAIAGSASIPYRERLLREVGVIQQMGFPGYFLIVADFIQWAKNNDVPVGPGRGSG
AGSLVAYALRITDLDPIAHGLLFERFLNPERVSMPDFDVDFCMDQRDRVIDYVAEKYGRD
RVGQIITFGTMKARAVVRDVGRVLNLPYGFVDQLAKLVPGDLGMTLEKALTESEELRRRQ
EEEDDVRELLDIALRLEGLPRHASTHAGGVVISPEPLADRLPLFTDGAEGSGNVTQLDKD
DVEKMGLVKFDFLGLRTLTIIDKAVKLVHAQQRQGGEALLNLQHLPMNDAASFALLKSHE
TSAVFQLESSGMRDLIRRLQPDTFEDIVALVALFRPGPLQSGMVDDFIARKHGKAAVSYP
HPDLAPILQETYGVIVYQEQVMQCAQVLAGYSLGGADLLRRAMGKKKPEEMAKQRAIFLE
GAAKNGISQGQASAIFDLMEKFAEYGFNKSHSAAYALVSYQTAYLKAHYPRIFMSAVLTA
DMDHTDKVVAMVSECMRMGIAVLPPDINTSALEFLPEGAAVRFGLGAVKGLGRAAVANIL
AAREAGVFTSLFDFLCRVDGQKLNRRGVEALIRAGAMDGWGTPRAVLMASLDTAMEGAAQ
YQKARASQQESLFAGLESLPMAPALADAPPWTLTETLRQERETLGFYLSGHPLESLRESL
ASMGVTPLNAITAGQSALLAGLVVARRSTRTKRGDRMYFLTLDDGFARVECIAFAEAWAA
AGKMGEGEDPVLVYGEVSEDSYAGGLRISAQRLLTLETARAELAAMLCLDLSKDAPVEEI
AHTVQRFPGNTPLRFRVHLDPLLVTLRAGEGFGVTVSNDLLEALARILPGNSMTLSFRPP
STLVHNVISLDRARQGARRPA
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgggtttcattcatttgcatgtccattccgaatactccctggaagacggaatc
attccggtgaagtcgctggtcaagcgctgcgcggccagcggtatgcccgccgtggccatc
accgaccacggcaacctctttgccctggtgaagttttacaccgcagcgcgctccgccggg
gtcaagcccatcatcggcagcgagatctggataacgaacccccaggacccgggccggccc
cacagtctggtactcctgtgcatgaatgaccagggctatcggcacttgagccggttgcta
agccgagcctatctgcagggattgcgcgatggccgcgcgcagatcgagcgggactggctg
gatggcgccagcgacgggctcatcgccctgtcggcagcggggcagggggaggtggggcgc
ctcctgctgcgcaatcccgatgcggctgcggaaacggcgcgttggtatgccgagcgtttt
ccggatcgtttttacctcgaagtgcagcgcaatggcgaggccgaacaggaggccctggta
acggccacggtcgccttggcccagcgcctggacctgccgctggtggccagcaacaacgcc
cattttctggatattgccgattttgccgcctttgacgcccgccagtgcatcgccgccggt
ctgaccttgagcgacagccgccgtccccggcgctttacgccggaacatcggttgcccaac
ccggaagagatgttggagcgatttgcggacctgctggaggcctgtcaaaacaccgtagag
attgcccagcgttgcaatctggaactcatcctcgggcactacgccctccctgattacccg
acaccccagggcgagcccatagatcaatattttcatgatgctgcggctgccgggctggac
caacggctggaggaactggccattgccggcagcgcctctatcccctaccgcgagcggctg
ctgcgcgaggtgggggtgattcagcaaatgggttttcccggctattttctcatcgtcgcc
gacttcatccagtgggccaagaacaacgatgtgccagtgggccccgggcgtggctccgga
gccggttccctggttgcctatgccctacgcatcaccgacctcgaccccatcgcccatggc
ttgcttttcgagcgcttcctcaacccagagcgcgtgtccatgcccgacttcgacgtggac
ttctgcatggatcagcgcgatcgtgtcattgattacgtggcggaaaaatatggccgcgac
cgggtggggcagatcatcaccttcggcaccatgaaggctcgcgccgtggtgcgcgatgtc
ggtcgggtgctgaacctgccctatggctttgtggaccaactggccaaactggtacccggc
gatctgggcatgaccctggaaaaggccctgaccgaatccgaagaactgcggcgccgccag
gaggaagaggacgacgtccgcgaactgctggacatcgccctgcgcctggagggcctgccg
cggcacgcctccacccatgccggcggcgtggtgatctcgccggagcccctggccgatcgc
ctgccgctctttacggacggtgcggagggcagcggcaacgtcacccagctcgacaaggat
gatgtggaaaaaatgggcctggtgaagttcgacttcctgggtctgcgtaccctgaccatc
atcgacaaggctgtcaagctcgtccatgcccaacagcggcagggcggtgaagccctgctc
aacctccagcacctgcccatgaatgacgccgccagtttcgccctgctcaagtcccatgaa
accagcgccgtctttcagttggaatcttcgggcatgcgcgacctcatccgccgcctgcaa
cccgacaccttcgaggacatcgtggcgctggtcgccctctttcgtccgggaccgctgcag
tcgggcatggtggacgacttcatcgcccgcaaacatggcaaggcggccgtcagttatccc
cacccggacctcgcccctatcctccaggaaacctacggcgtcattgtctatcaggaacag
gtgatgcagtgcgcccaggtcctggcgggttattccctgggcggcgccgacctgctgcgc
cgcgccatggggaagaaaaaaccggaggagatggccaaacagcgcgccatattcctggaa
ggcgcagcgaagaacggcatctcccaggggcaggcgtcggccattttcgacctgatggaa
aaatttgccgaatacggcttcaacaagtcccactccgccgcctacgccctggtgtcttac
cagaccgcctatctcaaagcccattatccccgcatctttatgtctgcggtgctcaccgcc
gatatggatcataccgacaaggtggtggccatggtcagcgagtgcatgcgcatgggcatt
gccgttctgccgccggacatcaacaccagcgccttggaatttttgccggaaggagcagcc
gtgcgttttggtctgggtgccgtcaagggcctgggccgcgctgcggtggcgaatatcctg
gcagcccgggaagcaggcgtctttaccagcctctttgattttctctgtcgggtggatggg
cagaagctcaatcgccggggtgtcgaggccctcatccgggcgggcgccatggatggctgg
ggaacgcctcgggccgtattgatggcctccctggacacggccatggagggcgcagcgcaa
taccaaaaggccagggccagccaacaggagtccctcttcgccggactcgaatccctcccc
atggctcccgcccttgcggatgcgccgccttggacgctgacggaaaccctgcgtcaggaa
cgggagaccctcggcttctacctgagcggacatcccctggagagtctgcgggaaagtttg
gcaagcatgggagtcaccccgctgaacgccattaccgccggtcagagcgcgctgctggca
gggctggtggtggcacggcgcagtacccgtaccaagcgcggtgaccggatgtatttcctc
acgctggatgatggttttgcgcgggtcgaatgcatcgcctttgccgaggcatgggccgca
gccggcaagatgggggagggcgaagatccggtactggtctacggggaagtgagcgaggat
agctatgccggcgggttgcggatcagcgcccagcgtcttttgaccctggagacggcacgt
gccgaactggctgccatgctctgtctggacctgtccaaagatgctccggtcgaggagatt
gcccataccgtacagcgtttcccggggaataccccattgcgtttccgggtgcacctggat
ccgctgctggtaaccctgcgcgccggggaggggttcggcgttacggtcagcaatgatctt
ctggaggcccttgcgcgcattttacccggaaattccatgaccctgagctttcgcccaccc
agcacgctggttcataatgtgatctctctggatcgtgcccgccagggcgcgcggcgtccg
gcctga
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