Achromobacter spanius: CVS48_01460
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Entry
CVS48_01460 CDS
T05274
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
asw
Achromobacter spanius
Pathway
asw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CVS48_01460 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asw03019
]
CVS48_01460 (recQ)
03400 DNA repair and recombination proteins [BR:
asw03400
]
CVS48_01460 (recQ)
Enzymes [BR:
asw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVS48_01460 (recQ)
Messenger RNA biogenesis [BR:
asw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CVS48_01460 (recQ)
DNA repair and recombination proteins [BR:
asw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CVS48_01460 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AUA54813
UniProt:
A0AA42LNE8
LinkDB
All DBs
Position
288660..290489
Genome browser
AA seq
609 aa
AA seq
DB search
MSDARALGVLQRVFGYESFRGDQQAIVEQVIDGGDALVLMPTGGGKSLCYQIPSLVREGT
GIVVSPLIALMQDQVDALTELGVRAAFLNSTQDWRVARDVEQAFLAGELDLLYVAPERLL
TDRCLQLLERGRIALFAIDEAHCVSQWGHDFRPEYLGLSMLHERWPDVPRIALTATATAD
TRTEIAQRLSLDDARHFVSSFDRPNIRYRIVEKNEVRKQLLEMIRTEHDGESGVVYGLSR
ARVEETAEFLCNQGIDAMPYHAGLSPQVRAANQSRFLREDGVVMVATIAFGMGIDKPDVR
FVAHIDLPKSVEGYYQETGRAGRDGLPATAWLAYGLQDVVQQRRMIDESPGDESYRRRLG
QQLDAMLGLCETVECRRVRLLAYFGQQITACGNCDVCLEPPQAWDGTVAAQKVLSAVYRL
WKERGQRYGAGHIIDILRGKVTDRTKQHGHETLSVFGVGEDLSDTAWRGVLRQLLAQGLL
TVDNEGFGTLALTEGSRAVLKGERQLMLRRESEKKTKSGKTSSGRTKAAAIDLPAELQPV
FEALRAWRGEVAKSHGVPAYVIFHDATLREIALAQPDSMDALSHISGVGARKLEAYGEEI
LQRVARPVL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcgcgcgccctcggcgtcctgcagcgcgttttcggttacgaatccttccgc
ggcgaccagcaagccattgtcgaacaagtgatcgacggcggtgacgcgctggtcctcatg
cccacgggcggagggaaatcgctctgttaccagattccgtccctggtgcgcgaaggcacc
ggcatcgtcgtgtcgcccctgatcgcgctgatgcaggaccaagtcgacgccctgaccgaa
cttggcgtgcgcgcggccttcctgaattccacgcaggattggcgcgtggctcgcgacgtt
gaacaagcgttcctggccggcgaacttgatttgctttacgtcgcgcccgaacggctgctg
accgaccgctgcctgcaactgcttgagcgcggccgcatcgccctgttcgccatcgacgag
gcgcactgcgtgtcgcaatgggggcatgatttccggccagaatacctgggcctgtccatg
ctgcacgagcgctggcccgacgtgccgcgcatcgcgcttaccgccacggccacggcggac
acccgcaccgagatcgcgcagcgcctgtcgctggacgatgcccggcatttcgtgtccagc
tttgaccgccccaacatccgctaccgcatcgtcgaaaagaacgaggtgcgcaagcaactg
ctggaaatgatccgcaccgaacacgacggcgagtccggcgtggtgtatggcttgtcgcgg
gcgcgggtcgaagagacggccgaattcctgtgcaaccagggtattgacgcaatgccctac
cacgccggcctcagcccgcaggtgcgcgcggccaaccagtcccgcttcctgcgcgaagac
ggcgtggtcatggtggccaccattgccttcggcatgggtatcgacaagccggacgtacgc
ttcgtggcgcacattgacctgcccaaatccgttgaaggctactaccaggaaaccggccgc
gccggccgcgatggcctgcccgccacggcgtggctggcctacggcctgcaagacgtggtg
cagcagcgtcgcatgatcgacgaatcccccggcgacgagtcctatcgccgacgcctgggc
cagcaactggacgccatgctgggcctgtgcgaaacggtggaatgccggcgggtgcgcctg
ctggcgtacttcggccagcagattaccgcctgcggcaactgcgacgtctgcctggaaccg
ccgcaagcctgggacggcaccgtggccgcgcagaaagtgctttcggccgtctatcgcttg
tggaaggaacgcgggcagcgctacggcgcgggccacatcatcgacatcctgcgcggcaag
gtcaccgaccgcaccaagcagcacggccatgaaaccctgagcgtgttcggcgtgggcgaa
gacctgagcgacaccgcctggcgcggcgtgctgcgccagttgctggcgcaaggcttgctg
accgtcgacaacgaaggcttcggcaccctggcgctaacggaaggcagccgcgccgtgctc
aagggcgaacgccagttgatgctgcgccgggaatccgaaaagaagacaaagtcgggcaag
acgagcagtggccgtaccaaggcggcggcgattgacctgccggctgaattgcaaccggtg
tttgaagcactgcgcgcctggcgcggcgaagtcgccaagagccacggcgtgccggcatac
gtcattttccacgacgccacgctacgcgaaatcgccctggcccagccggattcgatggat
gcgctgagccacatcagcggcgttggcgcccgcaagctggaagcctacggcgaagagatt
ctgcagcgggtggcaagaccggtgttatga
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