Achromobacter spanius: CVS48_03210
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Entry
CVS48_03210 CDS
T05274
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
asw
Achromobacter spanius
Brite
KEGG Orthology (KO) [BR:
asw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asw03016
]
CVS48_03210
Enzymes [BR:
asw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CVS48_03210
Transfer RNA biogenesis [BR:
asw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CVS48_03210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
DUF7691
RNase_P-MRP_p29
Motif
Other DBs
NCBI-ProteinID:
AUA55127
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Position
689139..691034
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AA seq
631 aa
AA seq
DB search
MYVFYEDDGSFKAGNILSETDASLQVESESGKRSKIKRANTLFNFASPEPAALMSQAAAA
ADELDLQFLWECAPQEEFDTPALAADYFGHAPTPVEHAALLMRLHSAPAYFHRRGKGRYR
PAPPDILAAALAALEKKQRQAEQQQEWVDEMAAGRLPEPIAQVAETLLIRPDKNSQQWKA
LDAACAKLGKSPDRLLLELGAWPHALALHKRRFLAVNFPRGLEFPELELPPIDRELPLSD
AEIYSVDDVTTTEIDDALSVTTLPDGRLRVGIHVAAPGLSVTRDSEFDKLARARLSTVYM
PGDKIPMQPDNVIKAFSLDAGREVPVLSLYVVADPETGEIIESDTRLERVVVRENLRHNM
LDAQVTEASLADPSVDIPYGHWLRPLWKLAQALSAQRENVRGKPENNSRVEYSFYLDGNP
DDPDTPVRLVPRQRNAPLDRMVAEYMILANNLWGGLLHQHGVPGIYRSQQAGRVRMSTQA
LPHEAIGVPQYAWSTSPLRRYVDLVNQWQLIAAVEHGVSARLVAPFKPRDADLFAIIGAF
DAQYAAWAEFQSAMERYWCLRWLKQHGVTRTVAHVLRDDLVRFANAPLVTRVGGMPELER
GTAVEIDILGMDELGLELDCRYVGELPPTSP
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgttttacgaagatgacggcagcttcaaggccggcaacatcctgtccgaaacc
gacgccagcctgcaggtggagtcggaatcgggcaagcgcagcaaaatcaagcgcgccaac
accctgttcaatttcgcgtcgcccgaaccggcggcgctgatgagccaggccgccgcggcc
gccgatgagctggacctgcaattcctttgggaatgcgccccccaggaagaattcgacacg
ccggcgcttgccgccgactacttcggccatgcccccacgcccgtggagcacgccgcgctg
ctgatgcgtctgcacagcgcgcccgcgtacttccaccgccgtggcaagggccgctaccgc
cctgccccgccggacatcctggccgccgcgctggccgcactggaaaagaagcagcgccag
gccgagcagcaacaggaatgggtcgatgagatggccgcgggccgcttgcccgagcccatt
gcgcaggttgccgaaactctgttgatccgtccggacaagaattcgcagcaatggaaggcg
ctggacgccgcctgcgccaagctgggcaaaagccccgaccgcctgctgctggaactgggc
gcgtggccgcatgcgctggcgctgcacaagcgtcgcttcctggcggttaacttcccgcgc
gggctggaattccccgagctggaactgccgcccattgaccgcgaactgccgctgtcggac
gccgagatctattcggtggacgacgtcaccaccaccgagatcgacgacgcgctgtctgtc
accacgctgcccgacggtcgcctgcgggtgggcatacacgtggccgcccccggcctgtcg
gtcacccgcgacagcgaattcgacaagctggcgcgcgcgcgcctgtccaccgtctacatg
ccgggcgacaagatcccgatgcagcccgacaacgtcatcaaggcgttctcgctggacgcg
ggccgcgaagtgcccgtgctgtcgctgtacgtggtggccgaccctgaaacgggcgagatc
atcgaatcggacacgcgcctggagcgcgtggtggtgcgcgaaaacctgcgccacaacatg
ctggacgcgcaggtcaccgaggccagcctggctgacccgtcggtcgatattccttacggc
cactggctgcgcccgctgtggaagctggcccaggcgctgtcggcgcaacgcgaaaacgtg
cgcggcaagcccgaaaacaattcccgcgtggaatacagcttctatctggacggcaacccc
gacgatccggacacgccggtgcgcctggttccgcgccagcgcaacgcgccgctggaccgc
atggtggccgaatacatgatcctggccaacaacctgtggggcggcctgctgcaccaacac
ggcgtgccgggcatctaccgttcgcaacaggccggccgcgtgcgcatgagcacgcaggcg
ctgccgcacgaagcgatcggcgtgccgcaatatgcatggagcacgtcgccgctgcgccgc
tatgtggacctggtcaaccaatggcagttgattgccgcggtggaacacggcgtgtcggcg
cgcctggtggccccgttcaagccgcgcgacgcggacctgttcgccatcatcggcgccttc
gacgcgcagtacgctgcgtgggctgaattccaaagcgccatggagcgctactggtgcctg
cgctggctcaagcagcacggcgtgacccgcaccgtagcgcacgtgctgcgcgacgacctg
gtccgcttcgccaacgcgccgctggtgacccgcgtgggcggcatgccagaactggaacgc
ggcaccgccgtcgaaatcgacatcctcggcatggacgaactcggcctggagctagactgc
cgctacgtaggcgaactcccccccactagcccgtag
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