Achromobacter spanius: CVS48_08875
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Entry
CVS48_08875 CDS
T05274
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
asw
Achromobacter spanius
Pathway
asw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
asw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CVS48_08875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
asw02000
]
CVS48_08875
Transporters [BR:
asw02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CVS48_08875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
AUA56136
LinkDB
All DBs
Position
1948404..1949453
Genome browser
AA seq
349 aa
AA seq
DB search
MQEKNLTRRGFIKSASGLALAPALGWVPGMAHAAEKQIVVGTWGGDYQNLLQQIINPIVT
KQGVTVVYDTGNAVGRVTKLRAEKNSRRGSMDVALLGEVDMYDAERSGTLEPIDAKKLPN
LAQAIAALKTPYSIPHIFSAMTLVYNTEKFPTPPDSLEVLLDPKWKGQVGFSDILYLYNS
VFVGLGAGGDTKSFDGGKRFLAKLKANAPRIYPSNEAVASAFKSGEIAIACMWKARALQW
KDSGLPLGFVIPKEGSVPVSFEAGVAKNSRNKDAAWEYLNAMLDPQGQVGFAEKMGYAPT
VTNASLPENLKRVGFTEAEVKLLKAYDLKGLTEGKADMLEFWNKEFKAG
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagaaaaacctgactcgccgtggcttcatcaaatccgcctctggcctggcgctg
gcccccgcgttgggctgggtgcccggcatggcgcacgccgccgaaaaacagatcgttgtg
ggcacctggggcggtgattaccaaaacctgttgcagcagatcatcaaccccatcgtcacc
aagcagggcgtgaccgtggtctacgacactggcaacgccgtgggccgcgtcaccaagctg
cgcgccgaaaagaactcgcggcgcggcagcatggacgtggcgctgctgggcgaagtcgac
atgtacgacgccgaacgctcgggcacgctggaacccatcgacgcgaagaaactgcccaac
ctggcgcaggccatcgccgcgctgaagacgccatactccattccgcacatcttcagcgcc
atgacgctggtctacaacaccgaaaaattccccacgccgccggactcgctggaagtgctg
ctggacccgaagtggaagggacaggtcggcttctcggacattctttatctgtacaactcg
gtgttcgtcggactgggcgcgggcggcgacaccaagagctttgacggcggcaagcgcttc
ctggccaagctcaaggccaacgcgccgcgcatctacccgtccaacgaagcggtggcatcc
gccttcaagtcgggcgagatcgccattgcgtgcatgtggaaagcgcgcgcgctgcaatgg
aaggacagcggcctgccgctgggcttcgtgattccgaaggaaggctcggtgccggtgtcg
tttgaagcgggcgtggccaagaacagccgcaacaaggacgccgcgtgggaatacctgaac
gccatgctcgacccgcaaggccaagtcggcttcgccgaaaaaatgggctacgcgccgacg
gtgaccaatgcgtcgctgccggaaaacctgaagcgcgtcggtttcaccgaggccgaggtg
aagctcttgaaggcgtatgacttgaagggcctgaccgaaggcaaagccgacatgctggaa
ttctggaacaaggaattcaaggcgggttga
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