KEGG   Achromobacter spanius: CVS48_16380
Entry
CVS48_16380       CDS       T05274                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
asw  Achromobacter spanius
Pathway
asw02020  Two-component system
Brite
KEGG Orthology (KO) [BR:asw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CVS48_16380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:asw03021]
    CVS48_16380
Transcription machinery [BR:asw03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CVS48_16380
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF Sigma70_r4 PhyR_sigma-like HTH_23 HTH_28 HTH_24 HTH_7 TnsD RRG8 HTH_Tnp_4 DUF2774
Other DBs
NCBI-ProteinID: AUA57454
LinkDB
Position
3603605..3604132
AA seq 175 aa
MSSLESLEHRELGLLYRDHHGWLRSWLQRRLSVPAEAADLTQDTFMRLLASPASMAQLQG
VRQPRSFLATVAQRTLVDHIRRQVLERAWLETLAQQPEAHAISPETQAILLETIREIDAM
LHGLGHKVRRAFLMSQLEGASYADIAVQLGVTVSSVKKYMARATEHCLVYALDRQ
NT seq 528 nt   +upstreamnt  +downstreamnt
atgtcgtccttggaatctctggagcaccgcgagctgggcttgctctaccgcgaccaccac
gggtggctgcggagttggctgcaacggcgcttgagcgtgcccgccgaagccgctgacctg
acgcaggacaccttcatgcgcctgctggcatccccggcgtcgatggcgcagttgcagggc
gtgcggcaaccacgcagttttctggccacggtggctcaacgcacgttggtggaccacatc
cgccgccaagtcttggaacgcgcctggctggaaacgctggctcagcagcccgaggcgcac
gccatttcccccgagacgcaggccatcctgctggaaaccatccgcgagatcgacgccatg
ctgcacggcctggggcataaggtgcgacgcgccttcctgatgtctcagctggaaggcgcc
agctatgcggacatcgccgtgcagttgggcgtcacggtcagttcggtgaagaagtacatg
gcgcgcgccaccgagcattgcctggtgtatgccttggacaggcagtag

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