Achromobacter spanius: CVS48_16380
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Entry
CVS48_16380 CDS
T05274
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
asw
Achromobacter spanius
Pathway
asw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
asw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CVS48_16380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asw03021
]
CVS48_16380
Transcription machinery [BR:
asw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CVS48_16380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
PhyR_sigma-like
HTH_23
HTH_28
HTH_24
HTH_7
TnsD
RRG8
HTH_Tnp_4
DUF2774
Motif
Other DBs
NCBI-ProteinID:
AUA57454
LinkDB
All DBs
Position
3603605..3604132
Genome browser
AA seq
175 aa
AA seq
DB search
MSSLESLEHRELGLLYRDHHGWLRSWLQRRLSVPAEAADLTQDTFMRLLASPASMAQLQG
VRQPRSFLATVAQRTLVDHIRRQVLERAWLETLAQQPEAHAISPETQAILLETIREIDAM
LHGLGHKVRRAFLMSQLEGASYADIAVQLGVTVSSVKKYMARATEHCLVYALDRQ
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccttggaatctctggagcaccgcgagctgggcttgctctaccgcgaccaccac
gggtggctgcggagttggctgcaacggcgcttgagcgtgcccgccgaagccgctgacctg
acgcaggacaccttcatgcgcctgctggcatccccggcgtcgatggcgcagttgcagggc
gtgcggcaaccacgcagttttctggccacggtggctcaacgcacgttggtggaccacatc
cgccgccaagtcttggaacgcgcctggctggaaacgctggctcagcagcccgaggcgcac
gccatttcccccgagacgcaggccatcctgctggaaaccatccgcgagatcgacgccatg
ctgcacggcctggggcataaggtgcgacgcgccttcctgatgtctcagctggaaggcgcc
agctatgcggacatcgccgtgcagttgggcgtcacggtcagttcggtgaagaagtacatg
gcgcgcgccaccgagcattgcctggtgtatgccttggacaggcagtag
DBGET
integrated database retrieval system