Achromobacter spanius: CVS48_18125
Help
Entry
CVS48_18125 CDS
T05274
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
asw
Achromobacter spanius
Pathway
asw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
asw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CVS48_18125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asw03021
]
CVS48_18125
Transcription machinery [BR:
asw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CVS48_18125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
TPR_4
Sigma70_ECF
HTH_23
HTH_17
MerR
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AUA57760
LinkDB
All DBs
Position
complement(4010801..4011379)
Genome browser
AA seq
192 aa
AA seq
DB search
MSQDFEHLYGNHHHWLLAWVNWRLGNAADAADLAHDAFVRLLTRPCHFDTPQQARSYLRK
MANGMCVDLWRRRSLEQAWLDTLAKQPEPTVSSAEDQAIVLEALGEIDTMLRELPPKVAH
AFVMAVACEMTDQEVADTLNVSARMVRKYVARAMLCCMKLEARLAAGLSDDTTDGLRDRL
ADDTATPSPATP
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
ttgtcccaggactttgaacacctgtacggcaaccatcaccattggttgctggcctgggtg
aactggcgcctgggcaacgcggccgacgcggccgacctggcgcacgatgctttcgtgcgg
ctgctcacccgcccctgccacttcgacactccgcagcaggcgcgcagctatttgcgcaag
atggccaacggcatgtgcgtggacctgtggcgccgccgcagcctggaacaagcctggctg
gacacgctggccaagcagcccgaacccaccgtgtcgtccgccgaggaccaggccatcgtg
cttgaagcgctgggcgaaatcgacaccatgctgcgcgagctgccgcccaaggtcgcgcac
gctttcgtcatggcggtcgcctgcgaaatgaccgaccaggaagttgctgacacgctgaac
gtatccgcccgcatggtgcgcaagtacgtggcgcgcgccatgctgtgctgcatgaagctg
gaagccaggctggccgctggcttgagcgacgacacgacagacggcctgcgcgaccgcctg
gccgacgacacggccaccccctcccccgccacgccatga
DBGET
integrated database retrieval system
