KEGG   Achromobacter spanius: CVS48_18775
Entry
CVS48_18775       CDS       T05274                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
asw  Achromobacter spanius
Brite
KEGG Orthology (KO) [BR:asw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:asw03400]
    CVS48_18775
Enzymes [BR:asw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CVS48_18775
    5.6.2.6  RNA 3'-5' helicase
     CVS48_18775
DNA repair and recombination proteins [BR:asw03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CVS48_18775
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: AUA60030
LinkDB
Position
complement(4167241..4169727)
AA seq 828 aa
MEPATKPATNPPARGWDAPLAAWFKARGWRAAAFQRETWQRYLAGESGLLHTPTGSGKTL
AAFGGPVLEALSNPDVARPTTGEGPRVLWVTPLRALATDTARALAQTASELGLGWTVALR
TGDASARDKRLARQGKADVLVITPESLALLLSYADASSRFRALRAVVVDEWHELLGNKRG
VLLQLCLARLRRLSPALRTWGLSATLGNLDEARDVLLPHRPQSALVAGARPRKVTLSTLL
PERNGALPWAGHLGLSQLPRVYKRLFDVRASLLFTNTRAQAELWHRALESIWPEDPATLA
LHHGSLDPALRNRAEQGLRDGSIRCVVATSSLDLGVDFPAVDQVLQVGSPKGVARLLQRA
GRAKHRPGESGHALCVPAQALELIEYAAARQAIARGEIESRPPPRGSLDVLAQHAVTLAL
GGGFKADALFDEVRGSHAYAELDVATWQAVLDFIVQGGRALSNYPEFRRVEKDEDGCYRV
HDRRIALRHRLSIGTITADGAVSVKYLRGGGLGSVEEGFLARLRPGDRFQFAGRTLELVR
LEGMTAYVRRAKGGDGPVATWQGGRMPLSTQLAREVLGLYAEPGDHPEMRAVEPLLRIQR
EASALPAPGRLLAERIATRRGMHVFLFPFAGRAVHEGMAAMVALRWGRLQANTFSYTVND
YGLMLTLAEPAELDDTLLRQLISPENMAADLRDGVNLGELARRQFREIARVAGLLTPSLP
GRAARSLRQVQASSGLLYDVLRRYDPDHLLLAQAEREVFEQQLEAPRLLAALQDCESRAL
DLCQPRALTPLSFPLWTESLRGQLSTESWQARVKRAAAQLEKRYAGIG
NT seq 2487 nt   +upstreamnt  +downstreamnt
atggagccggcgactaagcccgcgacaaacccgcccgcgcgcggctgggacgcgccgctg
gcggcctggttcaaggcacgcggctggcgggcggcggcgtttcagcgcgagacctggcaa
cggtatctggcgggcgaatccggcttgctgcacacgccaaccggcagcggcaaaacgctg
gcggccttcggtgggccagtgttggaagccttgtccaacccggatgtggcaaggccaaca
accggcgaaggcccccgggtgctctgggtgacgccgctgcgcgccctggccaccgacacc
gcccgcgccttggcccagacagcaagcgaactgggcctgggctggaccgtggccctgcgc
acgggcgacgccagcgcgcgcgacaaacggctggcccgccagggcaaggccgacgtgctg
gtcattacgccggaatcgctggcgctgcttttgtcgtacgcggatgcctcgtcgcgcttt
cgggcgctgcgcgcggtggtggtggatgaatggcatgaactgctgggcaataagcgcggc
gtgttgctgcaactgtgcctggcccgtctgcgacgcctgtcgcccgccttgcgcacctgg
ggcctgtcggccaccttgggcaatctggacgaagcgcgcgatgtcttgctgccgcatcgg
ccgcagagcgcattggtggcgggcgcgcggccgcgcaaggtgacgctgtcgaccttgctg
cccgagcgcaacggcgcgctgccctgggccgggcatctgggcttgtctcaattgccgcgc
gtgtacaagcggctgttcgacgtacgcgccagcctgctgttcaccaacacccgcgcgcag
gccgagctttggcaccgcgcgctggaatcgatctggccggaagacccggccacgctggcg
ctgcaccacggttcgctggacccggcgctgcgcaaccgcgccgaacagggcctgcgcgac
ggcagtattcgctgtgtggtggcgacctccagcctggacctgggcgtggactttccggcg
gtggaccaggtgttgcaggtgggcagccccaagggcgtggcgcggctgttgcagcgggca
gggcgggccaagcaccgtccgggcgaatccggccatgcgctgtgcgtgcccgcgcaggcg
ctggaactgatcgagtacgccgccgcgcgacaggccatcgcgcgcggcgaaatcgaatcg
cggcccccgccgcgcggcagcctggacgtgctggcgcagcacgcggtcacgctggcgctg
ggtggcggcttcaaggccgacgcgctgtttgacgaggtgcgcggcagccatgcgtatgcc
gagctggacgtggccacctggcaggcggtgctggatttcatcgtgcagggcggccgcgcc
ttgtccaactatccggaattccgccgcgttgaaaaagacgaagacggctgctaccgcgtg
cacgaccgccgcatcgcgctgcggcatcgcttgtccatcggcactatcacggcggacggc
gcggtgtcggtgaagtacttgcgcggcggcgggctgggctcggtcgaagaagggtttctg
gcacggctgcggccaggcgaccgtttccagtttgccggacgcaccttggaactggtgcgc
ctggaaggcatgacggcctatgtgcggcgggccaaggggggcgatgggccggtggccacc
tggcagggcgggcgcatgccgctgtccacgcagttggcgcgcgaagtgctgggcctgtat
gccgagcccggcgaccacccggaaatgcgcgcggtcgaacccttgctgcgcattcaacgc
gaagccagtgcgctgccggcgcccggtcggctgctggccgaacgcatcgccacgcggcgg
ggcatgcacgtgttcctgtttccgttcgcgggccgcgccgtccacgaaggcatggccgcc
atggtcgcgctgcgctggggccggcttcaggccaataccttttcctatacggtcaatgat
tacggcttgatgttgacgttggctgaacccgctgagctggacgacacgctgctgcgccaa
ctgatcagccccgagaacatggccgctgacctgcgcgacggcgtcaacctgggggagctt
gcccgcaggcaattccgggaaattgcgcgtgtggcgggcttgttgacgccgtcgctgccg
ggcagggcggcccgttcgctgcgccaggtgcaggcgtccagcggcctgctgtatgacgtg
ctgcgccgctacgaccccgaccacctgctgcttgcgcaagccgagcgcgaagtgtttgaa
cagcaattggaagccccgcgcctgctggcggcattgcaggattgcgaatcgcgcgcgctg
gacctgtgccaaccccgcgcgctgacacccctgtcgttcccgctatggaccgaaagcctg
cgcgggcagctcagcacggaaagctggcaggctcgagtcaagcgcgccgccgcgcaactg
gagaagcgctatgccggaatcgggtga

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