Achromobacter spanius: CVS48_21805
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Entry
CVS48_21805 CDS
T05274
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
asw
Achromobacter spanius
Pathway
asw03410
Base excision repair
asw03430
Mismatch repair
asw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CVS48_21805 (recJ)
03430 Mismatch repair
CVS48_21805 (recJ)
03440 Homologous recombination
CVS48_21805 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asw03400
]
CVS48_21805 (recJ)
DNA repair and recombination proteins [BR:
asw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CVS48_21805 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CVS48_21805 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CVS48_21805 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AUA58416
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All DBs
Position
4844810..4846510
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AA seq
566 aa
AA seq
DB search
MVSPRLTTRPAALEACRILEASGIHPLLARLWAARGVTHPDQTKLAWPSLLPPAGLTHSA
HAAGVLADAIQAGKKLLIVADYDCDGATACAVGLRALSAMGADVDFLVPNRFETGYGLSP
AVVDLAVRHRSGKPDIIITVDNGIASVDGVAAANDAGIGVVITDHHLPGDTLPDALAIVN
PNQPGCGFPSKNLAGVGVIFYMMLALRAELRRRGVYPADGGPRLDALSDLVALGTVADVV
KLDANNRLLVTQGLQRMRSGRLQPGLRALFAVAGREPRSANGFDLGFALGPRINAAGRLA
DMSLGIACLTTDDEAQALEMARELDNINRERRTIEAEMREQALAAMEEPNAAAGATVCVF
DPGWHQGVVGLVASRLKEKFWRPTLAFAPAGDDEIRGSGRSIPDVHLRDALDLVSKRHPN
LIRKFGGHAMAAGLTLGRADFPAFAPAFDAAVRELTGRDTFEPVIETDGSLESGYANAEV
AGMLQQQVWGAGFAAPLFLDEFTVRNQRLVGEKHLKLSLERGHQRFDAIWFGHDQSLPEH
IQAAYRLEQNVWNGMVSVQLVIEHAG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
gtggtctcaccccgcttaacgacccgacccgccgccctggaagcctgccgcatcctggaa
gcgtccggcatccacccgctgctggcccgcctgtgggccgcgcgcggcgtcacgcatcct
gatcaaaccaagctggcgtggccgtcgctgctgccgcccgccggcctgacccattccgcg
cacgccgccggcgtgctggccgacgccatccaggccggcaagaagctcttgatcgtggcc
gactacgattgcgacggcgccaccgcctgcgcggtcggcctgcgcgccctgtccgccatg
ggcgctgatgtcgacttcctggtgcccaaccgctttgaaaccggctatggcctgtcgccc
gccgtggtggacctggccgtgcgccaccgcagcggcaagcccgacatcatcatcaccgtg
gacaacggcatcgccagcgtcgacggcgtggccgccgccaacgacgccggtatcggcgtg
gtcatcaccgaccaccacttgccgggcgacaccctgcccgacgcgctggccatcgtgaac
ccgaaccagcccggctgcggctttccgtccaagaacctggcgggcgtgggcgtgatcttc
tacatgatgctggccttgcgcgccgagctgcgccgccgtggcgtctacccggccgatggc
ggcccgcgcctggatgcgctgtcggatctggtggccttgggcaccgtggccgacgtggtc
aaactggacgccaacaaccgcctgctggtcacgcaaggcctgcaacgcatgcgcagcggc
cgcctgcaacctggcctgcgcgcgctgtttgcggtggccggccgcgagccgcgcagcgcc
aatggtttcgacctgggctttgcgctgggcccgcgcatcaacgcggccggccgcctggcc
gacatgagcctgggcattgcctgcctgaccaccgatgacgaagcccaggcgctggaaatg
gcgcgcgagcttgacaacatcaaccgcgaacgccgcaccatcgaagccgaaatgcgcgag
caggccctggccgccatggaagaacccaacgcggcggcgggcgccacggtctgcgtgttc
gaccccggctggcaccagggcgtggtgggcctggtggcctcgcgcctgaaagaaaaattc
tggcgccccaccctggcgttcgcccccgcgggcgacgacgaaatccggggctcgggccgt
tcgattcccgacgtacacctgcgcgacgcgctggacctggtgtccaagcgccaccccaac
ctgatccgcaagttcggcggccacgccatggcggccggcctgacgctgggccgcgccgac
ttccccgccttcgcccccgcgttcgacgcggccgtgcgcgaactgaccggccgcgacacc
ttcgaacccgtcatcgaaaccgatggatctttggagtcgggctacgccaacgccgaagtt
gccggcatgctccagcaacaagtctggggcgcgggctttgccgcccccttgttcctggac
gagttcaccgtgcgcaaccagcgcctggtcggcgaaaagcatttgaagctgtccttggaa
cgcggccatcaacgttttgacgccatctggttcggccacgaccagtcactgccggaacat
atacaggcggcgtaccggctggagcaaaatgtgtggaacgggatggtgtcggtacagttg
gtgatcgaacacgcgggctaa
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